From a70847b9841f657a4a72c1c463978b4ceb97af09 Mon Sep 17 00:00:00 2001 From: cmungall Date: Thu, 9 May 2024 16:35:29 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20INCATool?= =?UTF-8?q?s/ontology-access-kit@c7c641bbdd387124f5e9de97b40893e7fc0795a6?= =?UTF-8?q?=20=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .../aggregator_knowledge_source.md.txt | 6 +-- .../datamodels/association/comments.md.txt | 2 +- .../association/evidence_type.md.txt | 2 +- .../datamodels/association/negated.md.txt | 2 +- _sources/datamodels/association/object.md.txt | 4 +- .../association/object_closure.md.txt | 2 +- .../association/object_closure_label.md.txt | 2 +- .../association/object_label.md.txt | 2 +- .../datamodels/association/predicate.md.txt | 4 +- .../association/predicate_label.md.txt | 2 +- .../primary_knowledge_source.md.txt | 6 +-- .../association/property_values.md.txt | 2 +- .../association/publications.md.txt | 4 +- .../datamodels/association/subject.md.txt | 4 +- .../association/subject_closure.md.txt | 2 +- .../association/subject_closure_label.md.txt | 2 +- .../association/subject_label.md.txt | 2 +- .../association/supporting_objects.md.txt | 2 +- .../datamodels/mapping-rules/rules.md.txt | 2 +- _sources/datamodels/obograph/id.md.txt | 4 +- _sources/datamodels/obograph/lang.md.txt | 4 +- _sources/datamodels/obograph/lbl.md.txt | 4 +- _sources/datamodels/obograph/meta.md.txt | 18 +++---- _sources/datamodels/obograph/pred.md.txt | 8 +-- _sources/datamodels/obograph/val.md.txt | 4 +- _sources/datamodels/obograph/valType.md.txt | 4 +- _sources/datamodels/obograph/xrefs.md.txt | 6 +-- .../IEDB_alternative_term.md.txt | 14 ++--- .../ISA_alternative_term.md.txt | 14 ++--- .../OBO_foundry_unique_label.md.txt | 14 ++--- .../ontology-metadata/alternative_term.md.txt | 14 ++--- .../ontology-metadata/broadMatch.md.txt | 14 ++--- .../ontology-metadata/cardinality.md.txt | 4 +- .../ontology-metadata/category.md.txt | 14 ++--- .../ontology-metadata/closeMatch.md.txt | 14 ++--- .../ontology-metadata/comment.md.txt | 18 +++---- .../ontology-metadata/complementOf.md.txt | 4 +- .../ontology-metadata/conformsTo.md.txt | 14 ++--- .../ontology-metadata/consider.md.txt | 16 +++--- .../ontology-metadata/contributor.md.txt | 14 ++--- .../ontology-metadata/created.md.txt | 16 +++--- .../ontology-metadata/created_by.md.txt | 16 +++--- .../ontology-metadata/creation_date.md.txt | 14 ++--- .../ontology-metadata/creator.md.txt | 16 +++--- .../ontology-metadata/curator_note.md.txt | 16 +++--- .../database_cross_reference.md.txt | 16 +++--- .../datamodels/ontology-metadata/date.md.txt | 14 ++--- .../ontology-metadata/definition.md.txt | 16 +++--- .../definition_source.md.txt | 14 ++--- .../ontology-metadata/depicted_by.md.txt | 16 +++--- .../ontology-metadata/deprecated.md.txt | 16 +++--- .../ontology-metadata/disjointWith.md.txt | 6 +-- .../ontology-metadata/domain.md.txt | 4 +- .../ontology-metadata/editor_note.md.txt | 14 ++--- .../editor_preferred_term.md.txt | 14 ++--- .../ontology-metadata/equivalentClass.md.txt | 4 +- .../equivalentProperty.md.txt | 2 +- .../ontology-metadata/exactMatch.md.txt | 14 ++--- .../ontology-metadata/example_of_usage.md.txt | 16 +++--- .../excluded_from_QC_check.md.txt | 16 +++--- .../excluded_subClassOf.md.txt | 16 +++--- .../ontology-metadata/excluded_synonym.md.txt | 16 +++--- .../has_alternative_id.md.txt | 16 +++--- .../has_broad_synonym.md.txt | 14 ++--- .../has_curation_status.md.txt | 16 +++--- .../has_exact_synonym.md.txt | 16 +++--- .../has_narrow_synonym.md.txt | 14 ++--- .../has_obo_namespace.md.txt | 14 ++--- .../has_obsolescence_reason.md.txt | 16 +++--- .../has_related_synonym.md.txt | 14 ++--- .../datamodels/ontology-metadata/id.md.txt | 16 +++--- .../datamodels/ontology-metadata/image.md.txt | 16 +++--- .../ontology-metadata/imported_from.md.txt | 14 ++--- .../ontology-metadata/in_subset.md.txt | 14 ++--- .../ontology-metadata/intersectionOf.md.txt | 4 +- .../ontology-metadata/inverseOf.md.txt | 2 +- .../ontology-metadata/isDefinedBy.md.txt | 14 ++--- .../ontology-metadata/is_class_level.md.txt | 4 +- .../ontology-metadata/is_cyclic.md.txt | 2 +- .../ontology-metadata/is_metadata_tag.md.txt | 4 +- .../ontology-metadata/is_transitive.md.txt | 2 +- .../datamodels/ontology-metadata/label.md.txt | 16 +++--- .../ontology-metadata/narrowMatch.md.txt | 14 ++--- .../datamodels/ontology-metadata/oneOf.md.txt | 4 +- .../ontology_term_requester.md.txt | 14 ++--- .../datamodels/ontology-metadata/page.md.txt | 16 +++--- .../propertyChainAxiom.md.txt | 2 +- .../datamodels/ontology-metadata/range.md.txt | 4 +- .../ontology-metadata/seeAlso.md.txt | 16 +++--- .../ontology-metadata/shorthand.md.txt | 2 +- .../should_conform_to.md.txt | 16 +++--- .../ontology-metadata/source.md.txt | 2 +- .../ontology-metadata/subClassOf.md.txt | 4 +- .../temporal_interpretation.md.txt | 2 +- .../ontology-metadata/term_editor.md.txt | 14 ++--- .../ontology-metadata/term_replaced_by.md.txt | 16 +++--- .../term_tracker_item.md.txt | 14 ++--- .../datamodels/ontology-metadata/type.md.txt | 20 +++---- .../ontology-metadata/unionOf.md.txt | 4 +- .../datamodels/summary-statistics/id.md.txt | 6 +-- .../datamodels/taxon-constraints/id.md.txt | 6 +-- .../datamodels/taxon-constraints/label.md.txt | 6 +-- .../text-annotator/subject_end.md.txt | 2 +- .../text-annotator/subject_label.md.txt | 2 +- .../text-annotator/subject_source.md.txt | 2 +- .../text-annotator/subject_start.md.txt | 2 +- .../text-annotator/subject_text_id.md.txt | 2 +- _sources/datamodels/validation/id.md.txt | 2 +- _sources/datamodels/validation/info.md.txt | 4 +- .../datamodels/validation/instantiates.md.txt | 4 +- _sources/datamodels/validation/object.md.txt | 4 +- .../datamodels/validation/object_str.md.txt | 4 +- .../datamodels/validation/predicate.md.txt | 4 +- _sources/datamodels/validation/results.md.txt | 4 +- .../datamodels/validation/severity.md.txt | 4 +- _sources/datamodels/validation/source.md.txt | 4 +- _sources/datamodels/validation/subject.md.txt | 4 +- _sources/datamodels/validation/type.md.txt | 4 +- association/aggregator_knowledge_source.md | 6 +-- association/comments.md | 2 +- association/evidence_type.md | 2 +- association/negated.md | 2 +- association/object.md | 4 +- association/object_closure.md | 2 +- association/object_closure_label.md | 2 +- association/object_label.md | 2 +- association/predicate.md | 4 +- association/predicate_label.md | 2 +- association/primary_knowledge_source.md | 6 +-- association/property_values.md | 2 +- association/publications.md | 4 +- association/subject.md | 4 +- association/subject_closure.md | 2 +- association/subject_closure_label.md | 2 +- association/subject_label.md | 2 +- association/supporting_objects.md | 2 +- .../aggregator_knowledge_source.html | 20 +++---- datamodels/association/comments.html | 12 ++--- datamodels/association/evidence_type.html | 12 ++--- datamodels/association/negated.html | 12 ++--- datamodels/association/object.html | 16 +++--- datamodels/association/object_closure.html | 12 ++--- .../association/object_closure_label.html | 12 ++--- datamodels/association/object_label.html | 12 ++--- datamodels/association/predicate.html | 16 +++--- datamodels/association/predicate_label.html | 12 ++--- .../association/primary_knowledge_source.html | 20 +++---- datamodels/association/property_values.html | 12 ++--- datamodels/association/publications.html | 16 +++--- datamodels/association/subject.html | 16 +++--- datamodels/association/subject_closure.html | 12 ++--- .../association/subject_closure_label.html | 12 ++--- datamodels/association/subject_label.html | 12 ++--- .../association/supporting_objects.html | 12 ++--- datamodels/mapping-rules/rules.html | 8 +-- datamodels/obograph/id.html | 14 ++--- datamodels/obograph/lang.html | 16 +++--- datamodels/obograph/lbl.html | 14 ++--- datamodels/obograph/meta.html | 52 +++++++++--------- datamodels/obograph/pred.html | 26 ++++----- datamodels/obograph/val.html | 20 +++---- datamodels/obograph/valType.html | 16 +++--- datamodels/obograph/xrefs.html | 26 ++++----- .../IEDB_alternative_term.html | 44 +++++++-------- .../ISA_alternative_term.html | 44 +++++++-------- .../OBO_foundry_unique_label.html | 44 +++++++-------- .../ontology-metadata/alternative_term.html | 44 +++++++-------- datamodels/ontology-metadata/broadMatch.html | 46 ++++++++-------- datamodels/ontology-metadata/cardinality.html | 4 +- datamodels/ontology-metadata/category.html | 36 ++++++------- datamodels/ontology-metadata/closeMatch.html | 46 ++++++++-------- datamodels/ontology-metadata/comment.html | 44 +++++++-------- .../ontology-metadata/complementOf.html | 4 +- datamodels/ontology-metadata/conformsTo.html | 36 ++++++------- datamodels/ontology-metadata/consider.html | 40 +++++++------- datamodels/ontology-metadata/contributor.html | 38 ++++++------- datamodels/ontology-metadata/created.html | 42 +++++++-------- datamodels/ontology-metadata/created_by.html | 38 ++++++------- .../ontology-metadata/creation_date.html | 38 ++++++------- datamodels/ontology-metadata/creator.html | 42 +++++++-------- .../ontology-metadata/curator_note.html | 38 ++++++------- .../database_cross_reference.html | 44 +++++++-------- datamodels/ontology-metadata/date.html | 38 ++++++------- datamodels/ontology-metadata/definition.html | 44 +++++++-------- .../ontology-metadata/definition_source.html | 38 ++++++------- datamodels/ontology-metadata/depicted_by.html | 38 ++++++------- datamodels/ontology-metadata/deprecated.html | 40 +++++++------- .../ontology-metadata/disjointWith.html | 16 +++--- datamodels/ontology-metadata/domain.html | 16 +++--- datamodels/ontology-metadata/editor_note.html | 38 ++++++------- .../editor_preferred_term.html | 44 +++++++-------- .../ontology-metadata/equivalentClass.html | 4 +- .../ontology-metadata/equivalentProperty.html | 8 +-- datamodels/ontology-metadata/exactMatch.html | 46 ++++++++-------- .../ontology-metadata/example_of_usage.html | 38 ++++++------- .../excluded_from_QC_check.html | 40 +++++++------- .../excluded_subClassOf.html | 40 +++++++------- .../ontology-metadata/excluded_synonym.html | 40 +++++++------- .../ontology-metadata/has_alternative_id.html | 40 +++++++------- .../ontology-metadata/has_broad_synonym.html | 44 +++++++-------- .../has_curation_status.html | 38 ++++++------- .../ontology-metadata/has_exact_synonym.html | 44 +++++++-------- .../ontology-metadata/has_narrow_synonym.html | 44 +++++++-------- .../ontology-metadata/has_obo_namespace.html | 36 ++++++------- .../has_obsolescence_reason.html | 40 +++++++------- .../has_related_synonym.html | 44 +++++++-------- datamodels/ontology-metadata/id.html | 54 +++++++++---------- datamodels/ontology-metadata/image.html | 38 ++++++------- .../ontology-metadata/imported_from.html | 38 ++++++------- datamodels/ontology-metadata/in_subset.html | 36 ++++++------- .../ontology-metadata/intersectionOf.html | 4 +- datamodels/ontology-metadata/inverseOf.html | 8 +-- datamodels/ontology-metadata/isDefinedBy.html | 38 ++++++------- .../ontology-metadata/is_class_level.html | 16 +++--- datamodels/ontology-metadata/is_cyclic.html | 8 +-- .../ontology-metadata/is_metadata_tag.html | 16 +++--- .../ontology-metadata/is_transitive.html | 8 +-- datamodels/ontology-metadata/label.html | 48 ++++++++--------- datamodels/ontology-metadata/narrowMatch.html | 46 ++++++++-------- datamodels/ontology-metadata/oneOf.html | 4 +- .../ontology_term_requester.html | 38 ++++++------- datamodels/ontology-metadata/page.html | 38 ++++++------- .../ontology-metadata/propertyChainAxiom.html | 8 +-- datamodels/ontology-metadata/range.html | 16 +++--- datamodels/ontology-metadata/seeAlso.html | 42 +++++++-------- datamodels/ontology-metadata/shorthand.html | 12 ++--- .../ontology-metadata/should_conform_to.html | 40 +++++++------- datamodels/ontology-metadata/source.html | 8 +-- datamodels/ontology-metadata/subClassOf.html | 8 +-- .../temporal_interpretation.html | 8 +-- datamodels/ontology-metadata/term_editor.html | 38 ++++++------- .../ontology-metadata/term_replaced_by.html | 40 +++++++------- .../ontology-metadata/term_tracker_item.html | 38 ++++++------- datamodels/ontology-metadata/type.html | 42 +++++++-------- datamodels/ontology-metadata/unionOf.html | 4 +- datamodels/summary-statistics/id.html | 22 ++++---- datamodels/taxon-constraints/id.html | 16 +++--- datamodels/taxon-constraints/label.html | 16 +++--- datamodels/text-annotator/subject_end.html | 8 +-- datamodels/text-annotator/subject_label.html | 8 +-- datamodels/text-annotator/subject_source.html | 8 +-- datamodels/text-annotator/subject_start.html | 8 +-- .../text-annotator/subject_text_id.html | 8 +-- datamodels/validation/id.html | 4 +- datamodels/validation/info.html | 12 ++--- datamodels/validation/instantiates.html | 8 +-- datamodels/validation/object.html | 8 +-- datamodels/validation/object_str.html | 8 +-- datamodels/validation/predicate.html | 8 +-- datamodels/validation/results.html | 8 +-- datamodels/validation/severity.html | 12 ++--- datamodels/validation/source.html | 8 +-- datamodels/validation/subject.html | 8 +-- datamodels/validation/type.html | 12 ++--- mapping-rules/rules.md | 2 +- obograph/id.md | 4 +- obograph/lang.md | 4 +- obograph/lbl.md | 4 +- obograph/meta.md | 18 +++---- obograph/pred.md | 8 +-- obograph/val.md | 4 +- obograph/valType.md | 4 +- obograph/xrefs.md | 6 +-- ontology-metadata/IEDB_alternative_term.md | 14 ++--- ontology-metadata/ISA_alternative_term.md | 14 ++--- ontology-metadata/OBO_foundry_unique_label.md | 14 ++--- ontology-metadata/alternative_term.md | 14 ++--- ontology-metadata/broadMatch.md | 14 ++--- ontology-metadata/cardinality.md | 4 +- ontology-metadata/category.md | 14 ++--- ontology-metadata/closeMatch.md | 14 ++--- ontology-metadata/comment.md | 18 +++---- ontology-metadata/complementOf.md | 4 +- ontology-metadata/conformsTo.md | 14 ++--- ontology-metadata/consider.md | 16 +++--- ontology-metadata/contributor.md | 14 ++--- ontology-metadata/created.md | 16 +++--- ontology-metadata/created_by.md | 16 +++--- ontology-metadata/creation_date.md | 14 ++--- ontology-metadata/creator.md | 16 +++--- ontology-metadata/curator_note.md | 16 +++--- ontology-metadata/database_cross_reference.md | 16 +++--- ontology-metadata/date.md | 14 ++--- ontology-metadata/definition.md | 16 +++--- ontology-metadata/definition_source.md | 14 ++--- ontology-metadata/depicted_by.md | 16 +++--- ontology-metadata/deprecated.md | 16 +++--- ontology-metadata/disjointWith.md | 6 +-- ontology-metadata/domain.md | 4 +- ontology-metadata/editor_note.md | 14 ++--- ontology-metadata/editor_preferred_term.md | 14 ++--- ontology-metadata/equivalentClass.md | 4 +- ontology-metadata/equivalentProperty.md | 2 +- ontology-metadata/exactMatch.md | 14 ++--- ontology-metadata/example_of_usage.md | 16 +++--- ontology-metadata/excluded_from_QC_check.md | 16 +++--- ontology-metadata/excluded_subClassOf.md | 16 +++--- ontology-metadata/excluded_synonym.md | 16 +++--- ontology-metadata/has_alternative_id.md | 16 +++--- ontology-metadata/has_broad_synonym.md | 14 ++--- ontology-metadata/has_curation_status.md | 16 +++--- ontology-metadata/has_exact_synonym.md | 16 +++--- ontology-metadata/has_narrow_synonym.md | 14 ++--- ontology-metadata/has_obo_namespace.md | 14 ++--- ontology-metadata/has_obsolescence_reason.md | 16 +++--- ontology-metadata/has_related_synonym.md | 14 ++--- ontology-metadata/id.md | 16 +++--- ontology-metadata/image.md | 16 +++--- ontology-metadata/imported_from.md | 14 ++--- ontology-metadata/in_subset.md | 14 ++--- ontology-metadata/intersectionOf.md | 4 +- ontology-metadata/inverseOf.md | 2 +- ontology-metadata/isDefinedBy.md | 14 ++--- ontology-metadata/is_class_level.md | 4 +- ontology-metadata/is_cyclic.md | 2 +- ontology-metadata/is_metadata_tag.md | 4 +- ontology-metadata/is_transitive.md | 2 +- ontology-metadata/label.md | 16 +++--- ontology-metadata/narrowMatch.md | 14 ++--- ontology-metadata/oneOf.md | 4 +- ontology-metadata/ontology_term_requester.md | 14 ++--- ontology-metadata/page.md | 16 +++--- ontology-metadata/propertyChainAxiom.md | 2 +- ontology-metadata/range.md | 4 +- ontology-metadata/seeAlso.md | 16 +++--- ontology-metadata/shorthand.md | 2 +- ontology-metadata/should_conform_to.md | 16 +++--- ontology-metadata/source.md | 2 +- ontology-metadata/subClassOf.md | 4 +- ontology-metadata/temporal_interpretation.md | 2 +- ontology-metadata/term_editor.md | 14 ++--- ontology-metadata/term_replaced_by.md | 16 +++--- ontology-metadata/term_tracker_item.md | 14 ++--- ontology-metadata/type.md | 20 +++---- ontology-metadata/unionOf.md | 4 +- summary-statistics/id.md | 6 +-- taxon-constraints/id.md | 6 +-- taxon-constraints/label.md | 6 +-- text-annotator/subject_end.md | 2 +- text-annotator/subject_label.md | 2 +- text-annotator/subject_source.md | 2 +- text-annotator/subject_start.md | 2 +- text-annotator/subject_text_id.md | 2 +- validation/id.md | 2 +- validation/info.md | 4 +- validation/instantiates.md | 4 +- validation/object.md | 4 +- validation/object_str.md | 4 +- validation/predicate.md | 4 +- validation/results.md | 4 +- validation/severity.md | 4 +- validation/source.md | 4 +- validation/subject.md | 4 +- validation/type.md | 4 +- 354 files changed, 2499 insertions(+), 2499 deletions(-) diff --git a/_sources/datamodels/association/aggregator_knowledge_source.md.txt b/_sources/datamodels/association/aggregator_knowledge_source.md.txt index ee7548ad9..f3a206828 100644 --- a/_sources/datamodels/association/aggregator_knowledge_source.md.txt +++ b/_sources/datamodels/association/aggregator_knowledge_source.md.txt @@ -21,11 +21,11 @@ URI: [biolink:aggregator_knowledge_source](https://w3id.org/biolink/vocab/aggreg | Name | Description | Modifies Slot | | --- | --- | --- | -| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | -| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | +| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no | diff --git a/_sources/datamodels/association/comments.md.txt b/_sources/datamodels/association/comments.md.txt index a8fcd9f0b..d83736004 100644 --- a/_sources/datamodels/association/comments.md.txt +++ b/_sources/datamodels/association/comments.md.txt @@ -21,9 +21,9 @@ URI: [rdfs:comment](rdfs:comment) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/evidence_type.md.txt b/_sources/datamodels/association/evidence_type.md.txt index 0108a34a3..0a0786a2e 100644 --- a/_sources/datamodels/association/evidence_type.md.txt +++ b/_sources/datamodels/association/evidence_type.md.txt @@ -21,9 +21,9 @@ URI: [ontoassoc:evidence_type](https://w3id.org/oak/association/evidence_type) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/negated.md.txt b/_sources/datamodels/association/negated.md.txt index ecb1441a7..da2e977fc 100644 --- a/_sources/datamodels/association/negated.md.txt +++ b/_sources/datamodels/association/negated.md.txt @@ -21,9 +21,9 @@ URI: [ontoassoc:negated](https://w3id.org/oak/association/negated) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | yes | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | yes | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | yes | diff --git a/_sources/datamodels/association/object.md.txt b/_sources/datamodels/association/object.md.txt index c09803c27..c8e203b55 100644 --- a/_sources/datamodels/association/object.md.txt +++ b/_sources/datamodels/association/object.md.txt @@ -29,10 +29,10 @@ URI: [rdf:object](rdf:object) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | -| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | +| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no | diff --git a/_sources/datamodels/association/object_closure.md.txt b/_sources/datamodels/association/object_closure.md.txt index a1da50b6c..4a257a1b4 100644 --- a/_sources/datamodels/association/object_closure.md.txt +++ b/_sources/datamodels/association/object_closure.md.txt @@ -21,9 +21,9 @@ URI: [ontoassoc:object_closure](https://w3id.org/oak/association/object_closure) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/object_closure_label.md.txt b/_sources/datamodels/association/object_closure_label.md.txt index 952bd1d84..42933c85f 100644 --- a/_sources/datamodels/association/object_closure_label.md.txt +++ b/_sources/datamodels/association/object_closure_label.md.txt @@ -21,9 +21,9 @@ URI: [ontoassoc:object_closure_label](https://w3id.org/oak/association/object_cl | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/object_label.md.txt b/_sources/datamodels/association/object_label.md.txt index f8edea4b6..fb3996448 100644 --- a/_sources/datamodels/association/object_label.md.txt +++ b/_sources/datamodels/association/object_label.md.txt @@ -25,9 +25,9 @@ URI: [sssom:object_label](https://w3id.org/sssom/object_label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/predicate.md.txt b/_sources/datamodels/association/predicate.md.txt index 6b23fd9c1..018ed772e 100644 --- a/_sources/datamodels/association/predicate.md.txt +++ b/_sources/datamodels/association/predicate.md.txt @@ -27,10 +27,10 @@ URI: [rdf:predicate](rdf:predicate) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | -| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | +| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no | diff --git a/_sources/datamodels/association/predicate_label.md.txt b/_sources/datamodels/association/predicate_label.md.txt index 0b96eb81f..dd09f780c 100644 --- a/_sources/datamodels/association/predicate_label.md.txt +++ b/_sources/datamodels/association/predicate_label.md.txt @@ -25,9 +25,9 @@ URI: [sssom:predicate_label](https://w3id.org/sssom/predicate_label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/primary_knowledge_source.md.txt b/_sources/datamodels/association/primary_knowledge_source.md.txt index 4334eaf99..d30d5d1ee 100644 --- a/_sources/datamodels/association/primary_knowledge_source.md.txt +++ b/_sources/datamodels/association/primary_knowledge_source.md.txt @@ -21,11 +21,11 @@ URI: [biolink:primary_knowledge_source](https://w3id.org/biolink/vocab/primary_k | Name | Description | Modifies Slot | | --- | --- | --- | -| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | -| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | +| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no | diff --git a/_sources/datamodels/association/property_values.md.txt b/_sources/datamodels/association/property_values.md.txt index ffb6fe918..a7f7078fe 100644 --- a/_sources/datamodels/association/property_values.md.txt +++ b/_sources/datamodels/association/property_values.md.txt @@ -21,9 +21,9 @@ URI: [ontoassoc:property_values](https://w3id.org/oak/association/property_value | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/publications.md.txt b/_sources/datamodels/association/publications.md.txt index d6ea8f888..633bb98d5 100644 --- a/_sources/datamodels/association/publications.md.txt +++ b/_sources/datamodels/association/publications.md.txt @@ -21,10 +21,10 @@ URI: [biolink:publications](https://w3id.org/biolink/vocab/publications) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | -| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | +| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | diff --git a/_sources/datamodels/association/subject.md.txt b/_sources/datamodels/association/subject.md.txt index 9cc23e852..4bf0ad10d 100644 --- a/_sources/datamodels/association/subject.md.txt +++ b/_sources/datamodels/association/subject.md.txt @@ -21,10 +21,10 @@ URI: [rdf:subject](rdf:subject) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | -| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | +| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | diff --git a/_sources/datamodels/association/subject_closure.md.txt b/_sources/datamodels/association/subject_closure.md.txt index 59c9ee0b6..5bd6bfaa8 100644 --- a/_sources/datamodels/association/subject_closure.md.txt +++ b/_sources/datamodels/association/subject_closure.md.txt @@ -21,9 +21,9 @@ URI: [ontoassoc:subject_closure](https://w3id.org/oak/association/subject_closur | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/subject_closure_label.md.txt b/_sources/datamodels/association/subject_closure_label.md.txt index 9fa9e1c1e..cba3e07e9 100644 --- a/_sources/datamodels/association/subject_closure_label.md.txt +++ b/_sources/datamodels/association/subject_closure_label.md.txt @@ -21,9 +21,9 @@ URI: [ontoassoc:subject_closure_label](https://w3id.org/oak/association/subject_ | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/subject_label.md.txt b/_sources/datamodels/association/subject_label.md.txt index baa96ab5e..25ae0ea05 100644 --- a/_sources/datamodels/association/subject_label.md.txt +++ b/_sources/datamodels/association/subject_label.md.txt @@ -25,9 +25,9 @@ URI: [sssom:subject_label](https://w3id.org/sssom/subject_label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/association/supporting_objects.md.txt b/_sources/datamodels/association/supporting_objects.md.txt index 580b3577f..a3615426a 100644 --- a/_sources/datamodels/association/supporting_objects.md.txt +++ b/_sources/datamodels/association/supporting_objects.md.txt @@ -21,9 +21,9 @@ URI: [ontoassoc:supporting_objects](https://w3id.org/oak/association/supporting_ | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/_sources/datamodels/mapping-rules/rules.md.txt b/_sources/datamodels/mapping-rules/rules.md.txt index dc695747f..1b068045d 100644 --- a/_sources/datamodels/mapping-rules/rules.md.txt +++ b/_sources/datamodels/mapping-rules/rules.md.txt @@ -16,8 +16,8 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) | Name | Description | Modifies Slot | | --- | --- | --- | -| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no | | [MappingRuleCollection](MappingRuleCollection.md) | A collection of mapping rules | no | +| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no | diff --git a/_sources/datamodels/obograph/id.md.txt b/_sources/datamodels/obograph/id.md.txt index 76ef7e43c..060cecc5e 100644 --- a/_sources/datamodels/obograph/id.md.txt +++ b/_sources/datamodels/obograph/id.md.txt @@ -21,10 +21,10 @@ URI: [obographs:id](https://github.com/geneontology/obographs/id) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | -| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | | [SubsetDefinition](SubsetDefinition.md) | | no | +| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | | [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no | +| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | diff --git a/_sources/datamodels/obograph/lang.md.txt b/_sources/datamodels/obograph/lang.md.txt index 134e96d99..2dac23bff 100644 --- a/_sources/datamodels/obograph/lang.md.txt +++ b/_sources/datamodels/obograph/lang.md.txt @@ -21,11 +21,11 @@ URI: [obographs:lang](https://github.com/geneontology/obographs/lang) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | diff --git a/_sources/datamodels/obograph/lbl.md.txt b/_sources/datamodels/obograph/lbl.md.txt index b6c6d5c1a..2d3091d66 100644 --- a/_sources/datamodels/obograph/lbl.md.txt +++ b/_sources/datamodels/obograph/lbl.md.txt @@ -21,10 +21,10 @@ URI: [rdfs:label](http://www.w3.org/2000/01/rdf-schema#label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | -| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | | [SubsetDefinition](SubsetDefinition.md) | | no | +| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | | [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no | +| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | diff --git a/_sources/datamodels/obograph/meta.md.txt b/_sources/datamodels/obograph/meta.md.txt index dd5dd6342..6034f8984 100644 --- a/_sources/datamodels/obograph/meta.md.txt +++ b/_sources/datamodels/obograph/meta.md.txt @@ -21,20 +21,20 @@ URI: [obographs:meta](https://github.com/geneontology/obographs/meta) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | -| [LogicalDefinitionAxiom](LogicalDefinitionAxiom.md) | An axiom that defines a class in terms of a genus or set of genus classes and... | no | -| [PropertyChainAxiom](PropertyChainAxiom.md) | An axiom that represents an OWL property chain, e | no | -| [GraphDocument](GraphDocument.md) | A graph document is a collection of graphs together with a set of prefixes th... | no | +| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no | -| [EquivalentNodesSet](EquivalentNodesSet.md) | A clique of nodes that are all mutually equivalent | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no | -| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | -| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | | [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | -| [Axiom](Axiom.md) | A generic grouping for any OWL axiom or group of axioms that is not captured ... | no | +| [EquivalentNodesSet](EquivalentNodesSet.md) | A clique of nodes that are all mutually equivalent | no | | [Edge](Edge.md) | An edge is a simple typed relationship between two nodes | no | | [DisjointClassExpressionsAxiom](DisjointClassExpressionsAxiom.md) | An axiom that defines a set of classes or class expressions as being mutually... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | +| [Axiom](Axiom.md) | A generic grouping for any OWL axiom or group of axioms that is not captured ... | no | +| [LogicalDefinitionAxiom](LogicalDefinitionAxiom.md) | An axiom that defines a class in terms of a genus or set of genus classes and... | no | +| [PropertyChainAxiom](PropertyChainAxiom.md) | An axiom that represents an OWL property chain, e | no | +| [GraphDocument](GraphDocument.md) | A graph document is a collection of graphs together with a set of prefixes th... | no | +| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | | [DomainRangeAxiom](DomainRangeAxiom.md) | This groups potentially multiple axioms that constrain the usage of a propert... | no | diff --git a/_sources/datamodels/obograph/pred.md.txt b/_sources/datamodels/obograph/pred.md.txt index 808182811..e73fbb1ab 100644 --- a/_sources/datamodels/obograph/pred.md.txt +++ b/_sources/datamodels/obograph/pred.md.txt @@ -21,13 +21,13 @@ URI: [rdf:predicate](http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | yes | -| [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no | -| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [Edge](Edge.md) | An edge is a simple typed relationship between two nodes | no | | [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | +| [Edge](Edge.md) | An edge is a simple typed relationship between two nodes | no | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | +| [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no | +| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | diff --git a/_sources/datamodels/obograph/val.md.txt b/_sources/datamodels/obograph/val.md.txt index abbd8de5f..243a270d5 100644 --- a/_sources/datamodels/obograph/val.md.txt +++ b/_sources/datamodels/obograph/val.md.txt @@ -21,11 +21,11 @@ URI: [rdf:object](http://www.w3.org/1999/02/22-rdf-syntax-ns#object) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | yes | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | yes | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | yes | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | yes | diff --git a/_sources/datamodels/obograph/valType.md.txt b/_sources/datamodels/obograph/valType.md.txt index 4462f2186..37a48fb88 100644 --- a/_sources/datamodels/obograph/valType.md.txt +++ b/_sources/datamodels/obograph/valType.md.txt @@ -21,11 +21,11 @@ URI: [obographs:valType](https://github.com/geneontology/obographs/valType) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | diff --git a/_sources/datamodels/obograph/xrefs.md.txt b/_sources/datamodels/obograph/xrefs.md.txt index 8e7772ef3..661659eb0 100644 --- a/_sources/datamodels/obograph/xrefs.md.txt +++ b/_sources/datamodels/obograph/xrefs.md.txt @@ -21,12 +21,12 @@ URI: [obographs:xrefs](https://github.com/geneontology/obographs/xrefs) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | -| [Meta](Meta.md) | A collection of annotations on an entity or ontology or edge or axiom | yes | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | yes | +| [Meta](Meta.md) | A collection of annotations on an entity or ontology or edge or axiom | yes | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | diff --git a/_sources/datamodels/ontology-metadata/IEDB_alternative_term.md.txt b/_sources/datamodels/ontology-metadata/IEDB_alternative_term.md.txt index 7e3da62d1..04562dcb1 100644 --- a/_sources/datamodels/ontology-metadata/IEDB_alternative_term.md.txt +++ b/_sources/datamodels/ontology-metadata/IEDB_alternative_term.md.txt @@ -21,18 +21,18 @@ URI: [OBI:9991118](http://purl.obolibrary.org/obo/OBI_9991118) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/ISA_alternative_term.md.txt b/_sources/datamodels/ontology-metadata/ISA_alternative_term.md.txt index 9d6742db1..e5ea6298b 100644 --- a/_sources/datamodels/ontology-metadata/ISA_alternative_term.md.txt +++ b/_sources/datamodels/ontology-metadata/ISA_alternative_term.md.txt @@ -21,18 +21,18 @@ URI: [OBI:0001847](http://purl.obolibrary.org/obo/OBI_0001847) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/OBO_foundry_unique_label.md.txt b/_sources/datamodels/ontology-metadata/OBO_foundry_unique_label.md.txt index 6ca150297..c9e2c71b6 100644 --- a/_sources/datamodels/ontology-metadata/OBO_foundry_unique_label.md.txt +++ b/_sources/datamodels/ontology-metadata/OBO_foundry_unique_label.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000589](http://purl.obolibrary.org/obo/IAO_0000589) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/alternative_term.md.txt b/_sources/datamodels/ontology-metadata/alternative_term.md.txt index 5ab7cabda..b2d6124f8 100644 --- a/_sources/datamodels/ontology-metadata/alternative_term.md.txt +++ b/_sources/datamodels/ontology-metadata/alternative_term.md.txt @@ -25,18 +25,18 @@ URI: [IAO:0000118](http://purl.obolibrary.org/obo/IAO_0000118) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/broadMatch.md.txt b/_sources/datamodels/ontology-metadata/broadMatch.md.txt index ef8aa0759..e4d85c744 100644 --- a/_sources/datamodels/ontology-metadata/broadMatch.md.txt +++ b/_sources/datamodels/ontology-metadata/broadMatch.md.txt @@ -21,18 +21,18 @@ URI: [skos:broadMatch](http://www.w3.org/2004/02/skos/core#broadMatch) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | yes | | [HasMappings](HasMappings.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/cardinality.md.txt b/_sources/datamodels/ontology-metadata/cardinality.md.txt index 95d91a393..bd17dac5a 100644 --- a/_sources/datamodels/ontology-metadata/cardinality.md.txt +++ b/_sources/datamodels/ontology-metadata/cardinality.md.txt @@ -21,9 +21,9 @@ URI: [owl:cardinality](http://www.w3.org/2002/07/owl#cardinality) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/category.md.txt b/_sources/datamodels/ontology-metadata/category.md.txt index 1ac32c2c5..57113178f 100644 --- a/_sources/datamodels/ontology-metadata/category.md.txt +++ b/_sources/datamodels/ontology-metadata/category.md.txt @@ -21,18 +21,18 @@ URI: [biolink:category](https://w3id.org/biolink/vocab/category) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HasCategory](HasCategory.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/closeMatch.md.txt b/_sources/datamodels/ontology-metadata/closeMatch.md.txt index 0c42d6ab3..2fd178de4 100644 --- a/_sources/datamodels/ontology-metadata/closeMatch.md.txt +++ b/_sources/datamodels/ontology-metadata/closeMatch.md.txt @@ -21,18 +21,18 @@ URI: [skos:closeMatch](http://www.w3.org/2004/02/skos/core#closeMatch) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | yes | | [HasMappings](HasMappings.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/comment.md.txt b/_sources/datamodels/ontology-metadata/comment.md.txt index 9c04ba804..b5fbdb2ba 100644 --- a/_sources/datamodels/ontology-metadata/comment.md.txt +++ b/_sources/datamodels/ontology-metadata/comment.md.txt @@ -21,20 +21,20 @@ URI: [rdfs:comment](http://www.w3.org/2000/01/rdf-schema#comment) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [Ontology](Ontology.md) | An OWL ontology | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/_sources/datamodels/ontology-metadata/complementOf.md.txt b/_sources/datamodels/ontology-metadata/complementOf.md.txt index 82e481e34..e5e753913 100644 --- a/_sources/datamodels/ontology-metadata/complementOf.md.txt +++ b/_sources/datamodels/ontology-metadata/complementOf.md.txt @@ -21,9 +21,9 @@ URI: [owl:complementOf](http://www.w3.org/2002/07/owl#complementOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/conformsTo.md.txt b/_sources/datamodels/ontology-metadata/conformsTo.md.txt index 03c858cd2..1cc1ad959 100644 --- a/_sources/datamodels/ontology-metadata/conformsTo.md.txt +++ b/_sources/datamodels/ontology-metadata/conformsTo.md.txt @@ -21,18 +21,18 @@ URI: [dcterms:conformsTo](http://purl.org/dc/terms/conformsTo) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HasCategory](HasCategory.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/consider.md.txt b/_sources/datamodels/ontology-metadata/consider.md.txt index 0f9ccab7e..e840b9994 100644 --- a/_sources/datamodels/ontology-metadata/consider.md.txt +++ b/_sources/datamodels/ontology-metadata/consider.md.txt @@ -21,18 +21,18 @@ URI: [oio:consider](http://www.geneontology.org/formats/oboInOwl#consider) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/contributor.md.txt b/_sources/datamodels/ontology-metadata/contributor.md.txt index 16abfae49..7dffcbd70 100644 --- a/_sources/datamodels/ontology-metadata/contributor.md.txt +++ b/_sources/datamodels/ontology-metadata/contributor.md.txt @@ -21,18 +21,18 @@ URI: [dcterms:contributor](http://purl.org/dc/terms/contributor) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/created.md.txt b/_sources/datamodels/ontology-metadata/created.md.txt index ece805c44..0e16e6c7d 100644 --- a/_sources/datamodels/ontology-metadata/created.md.txt +++ b/_sources/datamodels/ontology-metadata/created.md.txt @@ -26,19 +26,19 @@ URI: [dcterms:created](http://purl.org/dc/terms/created) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [Ontology](Ontology.md) | An OWL ontology | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/_sources/datamodels/ontology-metadata/created_by.md.txt b/_sources/datamodels/ontology-metadata/created_by.md.txt index 5e9010dbd..28c1d9c08 100644 --- a/_sources/datamodels/ontology-metadata/created_by.md.txt +++ b/_sources/datamodels/ontology-metadata/created_by.md.txt @@ -21,19 +21,19 @@ URI: [oio:created_by](http://www.geneontology.org/formats/oboInOwl#created_by) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasProvenance](HasProvenance.md) | | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasProvenance](HasProvenance.md) | | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/creation_date.md.txt b/_sources/datamodels/ontology-metadata/creation_date.md.txt index 29c7b50fc..9ca6a8096 100644 --- a/_sources/datamodels/ontology-metadata/creation_date.md.txt +++ b/_sources/datamodels/ontology-metadata/creation_date.md.txt @@ -21,18 +21,18 @@ URI: [oio:creation_date](http://www.geneontology.org/formats/oboInOwl#creation_d | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/creator.md.txt b/_sources/datamodels/ontology-metadata/creator.md.txt index 9f921cb1a..6151d6a7f 100644 --- a/_sources/datamodels/ontology-metadata/creator.md.txt +++ b/_sources/datamodels/ontology-metadata/creator.md.txt @@ -21,19 +21,19 @@ URI: [dcterms:creator](http://purl.org/dc/terms/creator) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [Ontology](Ontology.md) | An OWL ontology | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/_sources/datamodels/ontology-metadata/curator_note.md.txt b/_sources/datamodels/ontology-metadata/curator_note.md.txt index 339e6ea56..6d9c59d62 100644 --- a/_sources/datamodels/ontology-metadata/curator_note.md.txt +++ b/_sources/datamodels/ontology-metadata/curator_note.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000232](http://purl.obolibrary.org/obo/IAO_0000232) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/database_cross_reference.md.txt b/_sources/datamodels/ontology-metadata/database_cross_reference.md.txt index e033aa969..cab9b5341 100644 --- a/_sources/datamodels/ontology-metadata/database_cross_reference.md.txt +++ b/_sources/datamodels/ontology-metadata/database_cross_reference.md.txt @@ -21,19 +21,19 @@ URI: [oio:hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | -| [HasMappings](HasMappings.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | yes | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | +| [HasMappings](HasMappings.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/date.md.txt b/_sources/datamodels/ontology-metadata/date.md.txt index d62a008ee..b99d131da 100644 --- a/_sources/datamodels/ontology-metadata/date.md.txt +++ b/_sources/datamodels/ontology-metadata/date.md.txt @@ -26,18 +26,18 @@ URI: [dcterms:date](http://purl.org/dc/terms/date) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/definition.md.txt b/_sources/datamodels/ontology-metadata/definition.md.txt index cda00c955..8e356596c 100644 --- a/_sources/datamodels/ontology-metadata/definition.md.txt +++ b/_sources/datamodels/ontology-metadata/definition.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000115](http://purl.obolibrary.org/obo/IAO_0000115) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | yes | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | yes | | [Image](Image.md) | | no | -| [HasMinimalMetadata](HasMinimalMetadata.md) | Absolute minimum metadata model | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | yes | +| [Class](Class.md) | | yes | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasMinimalMetadata](HasMinimalMetadata.md) | Absolute minimum metadata model | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/definition_source.md.txt b/_sources/datamodels/ontology-metadata/definition_source.md.txt index 55d8258d7..818528a8e 100644 --- a/_sources/datamodels/ontology-metadata/definition_source.md.txt +++ b/_sources/datamodels/ontology-metadata/definition_source.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000119](http://purl.obolibrary.org/obo/IAO_0000119) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/depicted_by.md.txt b/_sources/datamodels/ontology-metadata/depicted_by.md.txt index 004cfec45..47343b0f2 100644 --- a/_sources/datamodels/ontology-metadata/depicted_by.md.txt +++ b/_sources/datamodels/ontology-metadata/depicted_by.md.txt @@ -21,18 +21,18 @@ URI: [foaf:depicted_by](http://xmlns.com/foaf/0.1/depicted_by) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/deprecated.md.txt b/_sources/datamodels/ontology-metadata/deprecated.md.txt index 663eebdff..de3429dba 100644 --- a/_sources/datamodels/ontology-metadata/deprecated.md.txt +++ b/_sources/datamodels/ontology-metadata/deprecated.md.txt @@ -21,18 +21,18 @@ URI: [owl:deprecated](http://www.w3.org/2002/07/owl#deprecated) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/disjointWith.md.txt b/_sources/datamodels/ontology-metadata/disjointWith.md.txt index c9ea1aee2..3f91a2dbe 100644 --- a/_sources/datamodels/ontology-metadata/disjointWith.md.txt +++ b/_sources/datamodels/ontology-metadata/disjointWith.md.txt @@ -21,12 +21,12 @@ URI: [owl:disjointWith](http://www.w3.org/2002/07/owl#disjointWith) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | | [PropertyExpression](PropertyExpression.md) | | no | -| [ClassExpression](ClassExpression.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/domain.md.txt b/_sources/datamodels/ontology-metadata/domain.md.txt index a937e2a5f..59d664d22 100644 --- a/_sources/datamodels/ontology-metadata/domain.md.txt +++ b/_sources/datamodels/ontology-metadata/domain.md.txt @@ -22,10 +22,10 @@ URI: [rdfs:domain](http://www.w3.org/2000/01/rdf-schema#domain) | Name | Description | Modifies Slot | | --- | --- | --- | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/editor_note.md.txt b/_sources/datamodels/ontology-metadata/editor_note.md.txt index 2f3a7f0d6..d370c6736 100644 --- a/_sources/datamodels/ontology-metadata/editor_note.md.txt +++ b/_sources/datamodels/ontology-metadata/editor_note.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000116](http://purl.obolibrary.org/obo/IAO_0000116) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/editor_preferred_term.md.txt b/_sources/datamodels/ontology-metadata/editor_preferred_term.md.txt index 2820a3dd4..ab52d4f17 100644 --- a/_sources/datamodels/ontology-metadata/editor_preferred_term.md.txt +++ b/_sources/datamodels/ontology-metadata/editor_preferred_term.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000111](http://purl.obolibrary.org/obo/IAO_0000111) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/equivalentClass.md.txt b/_sources/datamodels/ontology-metadata/equivalentClass.md.txt index a5c0b60d4..57b8ddfe9 100644 --- a/_sources/datamodels/ontology-metadata/equivalentClass.md.txt +++ b/_sources/datamodels/ontology-metadata/equivalentClass.md.txt @@ -21,9 +21,9 @@ URI: [owl:equivalentClass](http://www.w3.org/2002/07/owl#equivalentClass) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/equivalentProperty.md.txt b/_sources/datamodels/ontology-metadata/equivalentProperty.md.txt index 428266a71..d51f69cbb 100644 --- a/_sources/datamodels/ontology-metadata/equivalentProperty.md.txt +++ b/_sources/datamodels/ontology-metadata/equivalentProperty.md.txt @@ -21,8 +21,8 @@ URI: [owl:equivalentProperty](http://www.w3.org/2002/07/owl#equivalentProperty) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/_sources/datamodels/ontology-metadata/exactMatch.md.txt b/_sources/datamodels/ontology-metadata/exactMatch.md.txt index 75429d24c..a08416cea 100644 --- a/_sources/datamodels/ontology-metadata/exactMatch.md.txt +++ b/_sources/datamodels/ontology-metadata/exactMatch.md.txt @@ -21,18 +21,18 @@ URI: [skos:exactMatch](http://www.w3.org/2004/02/skos/core#exactMatch) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | yes | | [HasMappings](HasMappings.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/example_of_usage.md.txt b/_sources/datamodels/ontology-metadata/example_of_usage.md.txt index 5ca0003eb..eb13e6902 100644 --- a/_sources/datamodels/ontology-metadata/example_of_usage.md.txt +++ b/_sources/datamodels/ontology-metadata/example_of_usage.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000112](http://purl.obolibrary.org/obo/IAO_0000112) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/excluded_from_QC_check.md.txt b/_sources/datamodels/ontology-metadata/excluded_from_QC_check.md.txt index ea65adff8..f6f5f1b81 100644 --- a/_sources/datamodels/ontology-metadata/excluded_from_QC_check.md.txt +++ b/_sources/datamodels/ontology-metadata/excluded_from_QC_check.md.txt @@ -21,18 +21,18 @@ URI: [omoschema:excluded_from_QC_check](https://w3id.org/oak/ontology-metadata/e | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/excluded_subClassOf.md.txt b/_sources/datamodels/ontology-metadata/excluded_subClassOf.md.txt index 883b6604b..ebe53d641 100644 --- a/_sources/datamodels/ontology-metadata/excluded_subClassOf.md.txt +++ b/_sources/datamodels/ontology-metadata/excluded_subClassOf.md.txt @@ -21,18 +21,18 @@ URI: [omoschema:excluded_subClassOf](https://w3id.org/oak/ontology-metadata/excl | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/excluded_synonym.md.txt b/_sources/datamodels/ontology-metadata/excluded_synonym.md.txt index e64e5cbcc..ccb9e5e46 100644 --- a/_sources/datamodels/ontology-metadata/excluded_synonym.md.txt +++ b/_sources/datamodels/ontology-metadata/excluded_synonym.md.txt @@ -21,18 +21,18 @@ URI: [omoschema:excluded_synonym](https://w3id.org/oak/ontology-metadata/exclude | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/has_alternative_id.md.txt b/_sources/datamodels/ontology-metadata/has_alternative_id.md.txt index a1d3cbad8..e7b652a3b 100644 --- a/_sources/datamodels/ontology-metadata/has_alternative_id.md.txt +++ b/_sources/datamodels/ontology-metadata/has_alternative_id.md.txt @@ -26,18 +26,18 @@ URI: [oio:hasAlternativeId](http://www.geneontology.org/formats/oboInOwl#hasAlte | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/has_broad_synonym.md.txt b/_sources/datamodels/ontology-metadata/has_broad_synonym.md.txt index 2cc0e6c76..71922d34d 100644 --- a/_sources/datamodels/ontology-metadata/has_broad_synonym.md.txt +++ b/_sources/datamodels/ontology-metadata/has_broad_synonym.md.txt @@ -22,18 +22,18 @@ URI: [oio:hasBroadSynonym](http://www.geneontology.org/formats/oboInOwl#hasBroad | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/has_curation_status.md.txt b/_sources/datamodels/ontology-metadata/has_curation_status.md.txt index c254a613f..1a987226b 100644 --- a/_sources/datamodels/ontology-metadata/has_curation_status.md.txt +++ b/_sources/datamodels/ontology-metadata/has_curation_status.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000114](http://purl.obolibrary.org/obo/IAO_0000114) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/has_exact_synonym.md.txt b/_sources/datamodels/ontology-metadata/has_exact_synonym.md.txt index 2bff7b21b..f0492fc60 100644 --- a/_sources/datamodels/ontology-metadata/has_exact_synonym.md.txt +++ b/_sources/datamodels/ontology-metadata/has_exact_synonym.md.txt @@ -22,19 +22,19 @@ URI: [oio:hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExact | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | -| [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | +| [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/has_narrow_synonym.md.txt b/_sources/datamodels/ontology-metadata/has_narrow_synonym.md.txt index bb5143c28..c0b50dbc7 100644 --- a/_sources/datamodels/ontology-metadata/has_narrow_synonym.md.txt +++ b/_sources/datamodels/ontology-metadata/has_narrow_synonym.md.txt @@ -22,18 +22,18 @@ URI: [oio:hasNarrowSynonym](http://www.geneontology.org/formats/oboInOwl#hasNarr | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/has_obo_namespace.md.txt b/_sources/datamodels/ontology-metadata/has_obo_namespace.md.txt index 1463670ef..108dd2775 100644 --- a/_sources/datamodels/ontology-metadata/has_obo_namespace.md.txt +++ b/_sources/datamodels/ontology-metadata/has_obo_namespace.md.txt @@ -16,18 +16,18 @@ URI: [oio:hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONa | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HasCategory](HasCategory.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/has_obsolescence_reason.md.txt b/_sources/datamodels/ontology-metadata/has_obsolescence_reason.md.txt index 365618de2..52d8333a7 100644 --- a/_sources/datamodels/ontology-metadata/has_obsolescence_reason.md.txt +++ b/_sources/datamodels/ontology-metadata/has_obsolescence_reason.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000231](http://purl.obolibrary.org/obo/IAO_0000231) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/has_related_synonym.md.txt b/_sources/datamodels/ontology-metadata/has_related_synonym.md.txt index a1ca98121..12b7b1152 100644 --- a/_sources/datamodels/ontology-metadata/has_related_synonym.md.txt +++ b/_sources/datamodels/ontology-metadata/has_related_synonym.md.txt @@ -16,18 +16,18 @@ URI: [oio:hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRel | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/id.md.txt b/_sources/datamodels/ontology-metadata/id.md.txt index d9f6d6738..5f5854a4d 100644 --- a/_sources/datamodels/ontology-metadata/id.md.txt +++ b/_sources/datamodels/ontology-metadata/id.md.txt @@ -26,19 +26,19 @@ URI: [omoschema:id](https://w3id.org/oak/ontology-metadata/id) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NamedObject](NamedObject.md) | Anything with an IRI | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | +| [Class](Class.md) | | no | +| [HomoSapiens](HomoSapiens.md) | An individual human being | yes | | [Agent](Agent.md) | | yes | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | -| [Image](Image.md) | | no | +| [NamedObject](NamedObject.md) | Anything with an IRI | no | | [Ontology](Ontology.md) | An OWL ontology | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | -| [HomoSapiens](HomoSapiens.md) | An individual human being | yes | diff --git a/_sources/datamodels/ontology-metadata/image.md.txt b/_sources/datamodels/ontology-metadata/image.md.txt index 86f468bad..c4a6c1f8d 100644 --- a/_sources/datamodels/ontology-metadata/image.md.txt +++ b/_sources/datamodels/ontology-metadata/image.md.txt @@ -21,18 +21,18 @@ URI: [sdo:image](http://schema.org/image) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/imported_from.md.txt b/_sources/datamodels/ontology-metadata/imported_from.md.txt index defeab245..1051abb51 100644 --- a/_sources/datamodels/ontology-metadata/imported_from.md.txt +++ b/_sources/datamodels/ontology-metadata/imported_from.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000412](http://purl.obolibrary.org/obo/IAO_0000412) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/in_subset.md.txt b/_sources/datamodels/ontology-metadata/in_subset.md.txt index 630a77304..ae0391ea7 100644 --- a/_sources/datamodels/ontology-metadata/in_subset.md.txt +++ b/_sources/datamodels/ontology-metadata/in_subset.md.txt @@ -21,18 +21,18 @@ URI: [oio:inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HasCategory](HasCategory.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/intersectionOf.md.txt b/_sources/datamodels/ontology-metadata/intersectionOf.md.txt index cee3d6d8d..5ba0f0717 100644 --- a/_sources/datamodels/ontology-metadata/intersectionOf.md.txt +++ b/_sources/datamodels/ontology-metadata/intersectionOf.md.txt @@ -21,9 +21,9 @@ URI: [owl:intersectionOf](http://www.w3.org/2002/07/owl#intersectionOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/inverseOf.md.txt b/_sources/datamodels/ontology-metadata/inverseOf.md.txt index 6833d1948..ad9589ed8 100644 --- a/_sources/datamodels/ontology-metadata/inverseOf.md.txt +++ b/_sources/datamodels/ontology-metadata/inverseOf.md.txt @@ -21,8 +21,8 @@ URI: [owl:inverseOf](http://www.w3.org/2002/07/owl#inverseOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/_sources/datamodels/ontology-metadata/isDefinedBy.md.txt b/_sources/datamodels/ontology-metadata/isDefinedBy.md.txt index d8b0d0119..3fa47857a 100644 --- a/_sources/datamodels/ontology-metadata/isDefinedBy.md.txt +++ b/_sources/datamodels/ontology-metadata/isDefinedBy.md.txt @@ -16,18 +16,18 @@ URI: [rdfs:isDefinedBy](http://www.w3.org/2000/01/rdf-schema#isDefinedBy) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/is_class_level.md.txt b/_sources/datamodels/ontology-metadata/is_class_level.md.txt index 272500536..8fbb70f3b 100644 --- a/_sources/datamodels/ontology-metadata/is_class_level.md.txt +++ b/_sources/datamodels/ontology-metadata/is_class_level.md.txt @@ -17,10 +17,10 @@ URI: [oio:is_class_level](http://www.geneontology.org/formats/oboInOwl#is_class_ | Name | Description | Modifies Slot | | --- | --- | --- | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/is_cyclic.md.txt b/_sources/datamodels/ontology-metadata/is_cyclic.md.txt index 4d57821a6..d43d66908 100644 --- a/_sources/datamodels/ontology-metadata/is_cyclic.md.txt +++ b/_sources/datamodels/ontology-metadata/is_cyclic.md.txt @@ -16,8 +16,8 @@ URI: [oio:is_cyclic](http://www.geneontology.org/formats/oboInOwl#is_cyclic) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/_sources/datamodels/ontology-metadata/is_metadata_tag.md.txt b/_sources/datamodels/ontology-metadata/is_metadata_tag.md.txt index 7261f28ba..685610b6b 100644 --- a/_sources/datamodels/ontology-metadata/is_metadata_tag.md.txt +++ b/_sources/datamodels/ontology-metadata/is_metadata_tag.md.txt @@ -17,10 +17,10 @@ URI: [oio:is_metadata_tag](http://www.geneontology.org/formats/oboInOwl#is_metad | Name | Description | Modifies Slot | | --- | --- | --- | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/is_transitive.md.txt b/_sources/datamodels/ontology-metadata/is_transitive.md.txt index f3797d642..f74e25ce0 100644 --- a/_sources/datamodels/ontology-metadata/is_transitive.md.txt +++ b/_sources/datamodels/ontology-metadata/is_transitive.md.txt @@ -16,8 +16,8 @@ URI: [oio:is_transitive](http://www.geneontology.org/formats/oboInOwl#is_transit | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/_sources/datamodels/ontology-metadata/label.md.txt b/_sources/datamodels/ontology-metadata/label.md.txt index 3b9c100d3..c33292d35 100644 --- a/_sources/datamodels/ontology-metadata/label.md.txt +++ b/_sources/datamodels/ontology-metadata/label.md.txt @@ -21,19 +21,19 @@ URI: [rdfs:label](http://www.w3.org/2000/01/rdf-schema#label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | yes | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | yes | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [HasMinimalMetadata](HasMinimalMetadata.md) | Absolute minimum metadata model | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasMinimalMetadata](HasMinimalMetadata.md) | Absolute minimum metadata model | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/narrowMatch.md.txt b/_sources/datamodels/ontology-metadata/narrowMatch.md.txt index e2d818aee..f16b0abb1 100644 --- a/_sources/datamodels/ontology-metadata/narrowMatch.md.txt +++ b/_sources/datamodels/ontology-metadata/narrowMatch.md.txt @@ -21,18 +21,18 @@ URI: [skos:narrowMatch](http://www.w3.org/2004/02/skos/core#narrowMatch) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | yes | | [HasMappings](HasMappings.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/oneOf.md.txt b/_sources/datamodels/ontology-metadata/oneOf.md.txt index 51977402d..6676d6ec6 100644 --- a/_sources/datamodels/ontology-metadata/oneOf.md.txt +++ b/_sources/datamodels/ontology-metadata/oneOf.md.txt @@ -21,9 +21,9 @@ URI: [owl:oneOf](http://www.w3.org/2002/07/owl#oneOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/ontology_term_requester.md.txt b/_sources/datamodels/ontology-metadata/ontology_term_requester.md.txt index 412a513e4..81fac2dbd 100644 --- a/_sources/datamodels/ontology-metadata/ontology_term_requester.md.txt +++ b/_sources/datamodels/ontology-metadata/ontology_term_requester.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000234](http://purl.obolibrary.org/obo/IAO_0000234) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/page.md.txt b/_sources/datamodels/ontology-metadata/page.md.txt index a0f04f245..43e75c6fe 100644 --- a/_sources/datamodels/ontology-metadata/page.md.txt +++ b/_sources/datamodels/ontology-metadata/page.md.txt @@ -21,18 +21,18 @@ URI: [foaf:page](http://xmlns.com/foaf/0.1/page) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/propertyChainAxiom.md.txt b/_sources/datamodels/ontology-metadata/propertyChainAxiom.md.txt index 102cdb098..67424ca38 100644 --- a/_sources/datamodels/ontology-metadata/propertyChainAxiom.md.txt +++ b/_sources/datamodels/ontology-metadata/propertyChainAxiom.md.txt @@ -21,8 +21,8 @@ URI: [owl:propertyChainAxiom](http://www.w3.org/2002/07/owl#propertyChainAxiom) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/_sources/datamodels/ontology-metadata/range.md.txt b/_sources/datamodels/ontology-metadata/range.md.txt index 92abc8765..0544778a6 100644 --- a/_sources/datamodels/ontology-metadata/range.md.txt +++ b/_sources/datamodels/ontology-metadata/range.md.txt @@ -22,10 +22,10 @@ URI: [rdfs:range](http://www.w3.org/2000/01/rdf-schema#range) | Name | Description | Modifies Slot | | --- | --- | --- | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/seeAlso.md.txt b/_sources/datamodels/ontology-metadata/seeAlso.md.txt index d7e8b3959..7f6db5503 100644 --- a/_sources/datamodels/ontology-metadata/seeAlso.md.txt +++ b/_sources/datamodels/ontology-metadata/seeAlso.md.txt @@ -16,19 +16,19 @@ URI: [rdfs:seeAlso](http://www.w3.org/2000/01/rdf-schema#seeAlso) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/shorthand.md.txt b/_sources/datamodels/ontology-metadata/shorthand.md.txt index 5016fd3b4..060c28ff3 100644 --- a/_sources/datamodels/ontology-metadata/shorthand.md.txt +++ b/_sources/datamodels/ontology-metadata/shorthand.md.txt @@ -16,9 +16,9 @@ URI: [oio:shorthand](http://www.geneontology.org/formats/oboInOwl#shorthand) | Name | Description | Modifies Slot | | --- | --- | --- | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/_sources/datamodels/ontology-metadata/should_conform_to.md.txt b/_sources/datamodels/ontology-metadata/should_conform_to.md.txt index d1bae1035..1bdf74bfb 100644 --- a/_sources/datamodels/ontology-metadata/should_conform_to.md.txt +++ b/_sources/datamodels/ontology-metadata/should_conform_to.md.txt @@ -21,18 +21,18 @@ URI: [omoschema:should_conform_to](https://w3id.org/oak/ontology-metadata/should | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/source.md.txt b/_sources/datamodels/ontology-metadata/source.md.txt index 1ef2e85ef..91cbc4649 100644 --- a/_sources/datamodels/ontology-metadata/source.md.txt +++ b/_sources/datamodels/ontology-metadata/source.md.txt @@ -21,8 +21,8 @@ URI: [dcterms:source](http://purl.org/dc/terms/source) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Ontology](Ontology.md) | An OWL ontology | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/_sources/datamodels/ontology-metadata/subClassOf.md.txt b/_sources/datamodels/ontology-metadata/subClassOf.md.txt index 053e1802d..96a5f0da2 100644 --- a/_sources/datamodels/ontology-metadata/subClassOf.md.txt +++ b/_sources/datamodels/ontology-metadata/subClassOf.md.txt @@ -21,9 +21,9 @@ URI: [rdfs:subClassOf](http://www.w3.org/2000/01/rdf-schema#subClassOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | yes | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/temporal_interpretation.md.txt b/_sources/datamodels/ontology-metadata/temporal_interpretation.md.txt index a135e0baf..318299899 100644 --- a/_sources/datamodels/ontology-metadata/temporal_interpretation.md.txt +++ b/_sources/datamodels/ontology-metadata/temporal_interpretation.md.txt @@ -16,8 +16,8 @@ URI: [RO:0001900](http://purl.obolibrary.org/obo/RO_0001900) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/_sources/datamodels/ontology-metadata/term_editor.md.txt b/_sources/datamodels/ontology-metadata/term_editor.md.txt index ca1a7f2e8..de2233703 100644 --- a/_sources/datamodels/ontology-metadata/term_editor.md.txt +++ b/_sources/datamodels/ontology-metadata/term_editor.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000117](http://purl.obolibrary.org/obo/IAO_0000117) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/term_replaced_by.md.txt b/_sources/datamodels/ontology-metadata/term_replaced_by.md.txt index 4e054b2c5..968da69db 100644 --- a/_sources/datamodels/ontology-metadata/term_replaced_by.md.txt +++ b/_sources/datamodels/ontology-metadata/term_replaced_by.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0100001](http://purl.obolibrary.org/obo/IAO_0100001) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/_sources/datamodels/ontology-metadata/term_tracker_item.md.txt b/_sources/datamodels/ontology-metadata/term_tracker_item.md.txt index ae7bce31e..8c46127e4 100644 --- a/_sources/datamodels/ontology-metadata/term_tracker_item.md.txt +++ b/_sources/datamodels/ontology-metadata/term_tracker_item.md.txt @@ -21,18 +21,18 @@ URI: [IAO:0000233](http://purl.obolibrary.org/obo/IAO_0000233) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/_sources/datamodels/ontology-metadata/type.md.txt b/_sources/datamodels/ontology-metadata/type.md.txt index f131efe34..ab9c9917a 100644 --- a/_sources/datamodels/ontology-metadata/type.md.txt +++ b/_sources/datamodels/ontology-metadata/type.md.txt @@ -21,20 +21,20 @@ URI: [rdf:type](http://www.w3.org/1999/02/22-rdf-syntax-ns#type) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NamedObject](NamedObject.md) | Anything with an IRI | no | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | | [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | | [Thing](Thing.md) | | no | -| [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [Ontology](Ontology.md) | An OWL ontology | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [NamedObject](NamedObject.md) | Anything with an IRI | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/_sources/datamodels/ontology-metadata/unionOf.md.txt b/_sources/datamodels/ontology-metadata/unionOf.md.txt index 45bfe33d1..791e9ecc8 100644 --- a/_sources/datamodels/ontology-metadata/unionOf.md.txt +++ b/_sources/datamodels/ontology-metadata/unionOf.md.txt @@ -21,9 +21,9 @@ URI: [owl:unionOf](http://www.w3.org/2002/07/owl#unionOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/_sources/datamodels/summary-statistics/id.md.txt b/_sources/datamodels/summary-statistics/id.md.txt index 406a141b0..99859527b 100644 --- a/_sources/datamodels/summary-statistics/id.md.txt +++ b/_sources/datamodels/summary-statistics/id.md.txt @@ -16,12 +16,12 @@ URI: [summary_statistics:id](https://w3id.org/oaklib/summary_statistics.id) | Name | Description | Modifies Slot | | --- | --- | --- | -| [SummaryStatisticsReport](SummaryStatisticsReport.md) | abstract base class for all summary statistics reports | no | | [GroupedStatistics](GroupedStatistics.md) | summary statistics for the entire resource | no | +| [SummaryStatisticsReport](SummaryStatisticsReport.md) | abstract base class for all summary statistics reports | no | +| [ContributorRole](ContributorRole.md) | A role that a contributor can have | no | +| [UngroupedStatistics](UngroupedStatistics.md) | A summary statistics report object | no | | [Agent](Agent.md) | An agent | no | | [Ontology](Ontology.md) | An ontology | no | -| [UngroupedStatistics](UngroupedStatistics.md) | A summary statistics report object | no | -| [ContributorRole](ContributorRole.md) | A role that a contributor can have | no | diff --git a/_sources/datamodels/taxon-constraints/id.md.txt b/_sources/datamodels/taxon-constraints/id.md.txt index b7738b1ad..8a937a24d 100644 --- a/_sources/datamodels/taxon-constraints/id.md.txt +++ b/_sources/datamodels/taxon-constraints/id.md.txt @@ -21,10 +21,10 @@ URI: [tc:id](https://w3id.org/linkml/taxon_constraints/id) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Term](Term.md) | An ontology term | no | -| [SubjectTerm](SubjectTerm.md) | A term that is the subject of a taxon constraint | no | -| [Taxon](Taxon.md) | A term that represents a taxonomic group, may be at species level of a higher... | no | | [PredicateTerm](PredicateTerm.md) | A term that represents a relationship type | no | +| [Taxon](Taxon.md) | A term that represents a taxonomic group, may be at species level of a higher... | no | +| [SubjectTerm](SubjectTerm.md) | A term that is the subject of a taxon constraint | no | +| [Term](Term.md) | An ontology term | no | diff --git a/_sources/datamodels/taxon-constraints/label.md.txt b/_sources/datamodels/taxon-constraints/label.md.txt index 7546fd9dc..78683c28c 100644 --- a/_sources/datamodels/taxon-constraints/label.md.txt +++ b/_sources/datamodels/taxon-constraints/label.md.txt @@ -21,10 +21,10 @@ URI: [rdfs:label](http://www.w3.org/2000/01/rdf-schema#label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Term](Term.md) | An ontology term | no | -| [SubjectTerm](SubjectTerm.md) | A term that is the subject of a taxon constraint | no | -| [Taxon](Taxon.md) | A term that represents a taxonomic group, may be at species level of a higher... | no | | [PredicateTerm](PredicateTerm.md) | A term that represents a relationship type | no | +| [Taxon](Taxon.md) | A term that represents a taxonomic group, may be at species level of a higher... | no | +| [SubjectTerm](SubjectTerm.md) | A term that is the subject of a taxon constraint | no | +| [Term](Term.md) | An ontology term | no | diff --git a/_sources/datamodels/text-annotator/subject_end.md.txt b/_sources/datamodels/text-annotator/subject_end.md.txt index 20c0707b2..d161bde14 100644 --- a/_sources/datamodels/text-annotator/subject_end.md.txt +++ b/_sources/datamodels/text-annotator/subject_end.md.txt @@ -16,8 +16,8 @@ URI: [ann:subject_end](https://w3id.org/linkml/text_annotator/subject_end) | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/_sources/datamodels/text-annotator/subject_label.md.txt b/_sources/datamodels/text-annotator/subject_label.md.txt index ab71b81bd..58117545c 100644 --- a/_sources/datamodels/text-annotator/subject_label.md.txt +++ b/_sources/datamodels/text-annotator/subject_label.md.txt @@ -21,8 +21,8 @@ URI: [ann:subject_label](https://w3id.org/linkml/text_annotator/subject_label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/_sources/datamodels/text-annotator/subject_source.md.txt b/_sources/datamodels/text-annotator/subject_source.md.txt index a483bfe2d..be42b1ff3 100644 --- a/_sources/datamodels/text-annotator/subject_source.md.txt +++ b/_sources/datamodels/text-annotator/subject_source.md.txt @@ -16,8 +16,8 @@ URI: [sssom:subject_source](http://w3id.org/sssom/subject_source) | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/_sources/datamodels/text-annotator/subject_start.md.txt b/_sources/datamodels/text-annotator/subject_start.md.txt index b65647c1f..46c36d570 100644 --- a/_sources/datamodels/text-annotator/subject_start.md.txt +++ b/_sources/datamodels/text-annotator/subject_start.md.txt @@ -16,8 +16,8 @@ URI: [ann:subject_start](https://w3id.org/linkml/text_annotator/subject_start) | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/_sources/datamodels/text-annotator/subject_text_id.md.txt b/_sources/datamodels/text-annotator/subject_text_id.md.txt index 6ac072152..37a81887b 100644 --- a/_sources/datamodels/text-annotator/subject_text_id.md.txt +++ b/_sources/datamodels/text-annotator/subject_text_id.md.txt @@ -16,8 +16,8 @@ URI: [ann:subject_text_id](https://w3id.org/linkml/text_annotator/subject_text_i | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/_sources/datamodels/validation/id.md.txt b/_sources/datamodels/validation/id.md.txt index 453747867..a161bed8e 100644 --- a/_sources/datamodels/validation/id.md.txt +++ b/_sources/datamodels/validation/id.md.txt @@ -17,8 +17,8 @@ URI: [vm:id](https://w3id.org/linkml/validation-model/id) | Name | Description | Modifies Slot | | --- | --- | --- | | [Node](Node.md) | | no | -| [NamedResource](NamedResource.md) | | no | | [ConstraintComponent](ConstraintComponent.md) | | no | +| [NamedResource](NamedResource.md) | | no | diff --git a/_sources/datamodels/validation/info.md.txt b/_sources/datamodels/validation/info.md.txt index 48a4a2da3..974d837a3 100644 --- a/_sources/datamodels/validation/info.md.txt +++ b/_sources/datamodels/validation/info.md.txt @@ -22,10 +22,10 @@ URI: [sh:resultMessage](http://www.w3.org/ns/shacl#resultMessage) | Name | Description | Modifies Slot | | --- | --- | --- | | [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | | [MappingValidationResult](MappingValidationResult.md) | A validation result where the check is to determine if a mapping is correct | no | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | | [RepairOperation](RepairOperation.md) | The result of performing an individual repair | no | -| [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/_sources/datamodels/validation/instantiates.md.txt b/_sources/datamodels/validation/instantiates.md.txt index 3a5e8c295..c87a8d838 100644 --- a/_sources/datamodels/validation/instantiates.md.txt +++ b/_sources/datamodels/validation/instantiates.md.txt @@ -21,9 +21,9 @@ URI: [vm:instantiates](https://w3id.org/linkml/validation-model/instantiates) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/_sources/datamodels/validation/object.md.txt b/_sources/datamodels/validation/object.md.txt index 2e3592269..005d1b1b9 100644 --- a/_sources/datamodels/validation/object.md.txt +++ b/_sources/datamodels/validation/object.md.txt @@ -16,9 +16,9 @@ URI: [sh:value](http://www.w3.org/ns/shacl#value) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/_sources/datamodels/validation/object_str.md.txt b/_sources/datamodels/validation/object_str.md.txt index 840d518ef..3bd12e741 100644 --- a/_sources/datamodels/validation/object_str.md.txt +++ b/_sources/datamodels/validation/object_str.md.txt @@ -16,9 +16,9 @@ URI: [vm:object_str](https://w3id.org/linkml/validation-model/object_str) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/_sources/datamodels/validation/predicate.md.txt b/_sources/datamodels/validation/predicate.md.txt index 3f80dcdd1..1e06e442f 100644 --- a/_sources/datamodels/validation/predicate.md.txt +++ b/_sources/datamodels/validation/predicate.md.txt @@ -21,9 +21,9 @@ URI: [vm:predicate](https://w3id.org/linkml/validation-model/predicate) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/_sources/datamodels/validation/results.md.txt b/_sources/datamodels/validation/results.md.txt index af5b91fe3..80002c036 100644 --- a/_sources/datamodels/validation/results.md.txt +++ b/_sources/datamodels/validation/results.md.txt @@ -21,9 +21,9 @@ URI: [sh:result](http://www.w3.org/ns/shacl#result) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ValidationReport](ValidationReport.md) | A report that consists of validation results | yes | -| [Report](Report.md) | A report object that is a holder to multiple report results | no | | [RepairReport](RepairReport.md) | A report that consists of repair operation results | yes | +| [Report](Report.md) | A report object that is a holder to multiple report results | no | +| [ValidationReport](ValidationReport.md) | A report that consists of validation results | yes | diff --git a/_sources/datamodels/validation/severity.md.txt b/_sources/datamodels/validation/severity.md.txt index 6e6889306..988bf794f 100644 --- a/_sources/datamodels/validation/severity.md.txt +++ b/_sources/datamodels/validation/severity.md.txt @@ -21,10 +21,10 @@ URI: [sh:resultSeverity](http://www.w3.org/ns/shacl#resultSeverity) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | | [DefinitionValidationResult](DefinitionValidationResult.md) | | no | -| [TypeSeverityKeyValue](TypeSeverityKeyValue.md) | key-value pair that maps a validation result type to a severity setting, for ... | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [TypeSeverityKeyValue](TypeSeverityKeyValue.md) | key-value pair that maps a validation result type to a severity setting, for ... | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/_sources/datamodels/validation/source.md.txt b/_sources/datamodels/validation/source.md.txt index 0902c4d63..edad368de 100644 --- a/_sources/datamodels/validation/source.md.txt +++ b/_sources/datamodels/validation/source.md.txt @@ -16,9 +16,9 @@ URI: [vm:source](https://w3id.org/linkml/validation-model/source) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/_sources/datamodels/validation/subject.md.txt b/_sources/datamodels/validation/subject.md.txt index cdbab69a6..060e3bf89 100644 --- a/_sources/datamodels/validation/subject.md.txt +++ b/_sources/datamodels/validation/subject.md.txt @@ -21,9 +21,9 @@ URI: [sh:focusNode](http://www.w3.org/ns/shacl#focusNode) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/_sources/datamodels/validation/type.md.txt b/_sources/datamodels/validation/type.md.txt index d1d7d06df..12654cf29 100644 --- a/_sources/datamodels/validation/type.md.txt +++ b/_sources/datamodels/validation/type.md.txt @@ -21,10 +21,10 @@ URI: [sh:sourceConstraintComponent](http://www.w3.org/ns/shacl#sourceConstraintC | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | | [DefinitionValidationResult](DefinitionValidationResult.md) | | no | -| [TypeSeverityKeyValue](TypeSeverityKeyValue.md) | key-value pair that maps a validation result type to a severity setting, for ... | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [TypeSeverityKeyValue](TypeSeverityKeyValue.md) | key-value pair that maps a validation result type to a severity setting, for ... | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/association/aggregator_knowledge_source.md b/association/aggregator_knowledge_source.md index ee7548ad9..f3a206828 100644 --- a/association/aggregator_knowledge_source.md +++ b/association/aggregator_knowledge_source.md @@ -21,11 +21,11 @@ URI: [biolink:aggregator_knowledge_source](https://w3id.org/biolink/vocab/aggreg | Name | Description | Modifies Slot | | --- | --- | --- | -| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | -| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | +| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no | diff --git a/association/comments.md b/association/comments.md index a8fcd9f0b..d83736004 100644 --- a/association/comments.md +++ b/association/comments.md @@ -21,9 +21,9 @@ URI: [rdfs:comment](rdfs:comment) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/evidence_type.md b/association/evidence_type.md index 0108a34a3..0a0786a2e 100644 --- a/association/evidence_type.md +++ b/association/evidence_type.md @@ -21,9 +21,9 @@ URI: [ontoassoc:evidence_type](https://w3id.org/oak/association/evidence_type) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/negated.md b/association/negated.md index ecb1441a7..da2e977fc 100644 --- a/association/negated.md +++ b/association/negated.md @@ -21,9 +21,9 @@ URI: [ontoassoc:negated](https://w3id.org/oak/association/negated) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | yes | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | yes | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | yes | diff --git a/association/object.md b/association/object.md index c09803c27..c8e203b55 100644 --- a/association/object.md +++ b/association/object.md @@ -29,10 +29,10 @@ URI: [rdf:object](rdf:object) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | -| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | +| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no | diff --git a/association/object_closure.md b/association/object_closure.md index a1da50b6c..4a257a1b4 100644 --- a/association/object_closure.md +++ b/association/object_closure.md @@ -21,9 +21,9 @@ URI: [ontoassoc:object_closure](https://w3id.org/oak/association/object_closure) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/object_closure_label.md b/association/object_closure_label.md index 952bd1d84..42933c85f 100644 --- a/association/object_closure_label.md +++ b/association/object_closure_label.md @@ -21,9 +21,9 @@ URI: [ontoassoc:object_closure_label](https://w3id.org/oak/association/object_cl | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/object_label.md b/association/object_label.md index f8edea4b6..fb3996448 100644 --- a/association/object_label.md +++ b/association/object_label.md @@ -25,9 +25,9 @@ URI: [sssom:object_label](https://w3id.org/sssom/object_label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/predicate.md b/association/predicate.md index 6b23fd9c1..018ed772e 100644 --- a/association/predicate.md +++ b/association/predicate.md @@ -27,10 +27,10 @@ URI: [rdf:predicate](rdf:predicate) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | -| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | +| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no | diff --git a/association/predicate_label.md b/association/predicate_label.md index 0b96eb81f..dd09f780c 100644 --- a/association/predicate_label.md +++ b/association/predicate_label.md @@ -25,9 +25,9 @@ URI: [sssom:predicate_label](https://w3id.org/sssom/predicate_label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/primary_knowledge_source.md b/association/primary_knowledge_source.md index 4334eaf99..d30d5d1ee 100644 --- a/association/primary_knowledge_source.md +++ b/association/primary_knowledge_source.md @@ -21,11 +21,11 @@ URI: [biolink:primary_knowledge_source](https://w3id.org/biolink/vocab/primary_k | Name | Description | Modifies Slot | | --- | --- | --- | -| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | -| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | +| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no | diff --git a/association/property_values.md b/association/property_values.md index ffb6fe918..a7f7078fe 100644 --- a/association/property_values.md +++ b/association/property_values.md @@ -21,9 +21,9 @@ URI: [ontoassoc:property_values](https://w3id.org/oak/association/property_value | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/publications.md b/association/publications.md index d6ea8f888..633bb98d5 100644 --- a/association/publications.md +++ b/association/publications.md @@ -21,10 +21,10 @@ URI: [biolink:publications](https://w3id.org/biolink/vocab/publications) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | -| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | +| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | diff --git a/association/subject.md b/association/subject.md index 9cc23e852..4bf0ad10d 100644 --- a/association/subject.md +++ b/association/subject.md @@ -21,10 +21,10 @@ URI: [rdf:subject](rdf:subject) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | -| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | +| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no | diff --git a/association/subject_closure.md b/association/subject_closure.md index 59c9ee0b6..5bd6bfaa8 100644 --- a/association/subject_closure.md +++ b/association/subject_closure.md @@ -21,9 +21,9 @@ URI: [ontoassoc:subject_closure](https://w3id.org/oak/association/subject_closur | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/subject_closure_label.md b/association/subject_closure_label.md index 9fa9e1c1e..cba3e07e9 100644 --- a/association/subject_closure_label.md +++ b/association/subject_closure_label.md @@ -21,9 +21,9 @@ URI: [ontoassoc:subject_closure_label](https://w3id.org/oak/association/subject_ | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/subject_label.md b/association/subject_label.md index baa96ab5e..25ae0ea05 100644 --- a/association/subject_label.md +++ b/association/subject_label.md @@ -25,9 +25,9 @@ URI: [sssom:subject_label](https://w3id.org/sssom/subject_label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/association/supporting_objects.md b/association/supporting_objects.md index 580b3577f..a3615426a 100644 --- a/association/supporting_objects.md +++ b/association/supporting_objects.md @@ -21,9 +21,9 @@ URI: [ontoassoc:supporting_objects](https://w3id.org/oak/association/supporting_ | Name | Description | Modifies Slot | | --- | --- | --- | -| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | | [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no | | [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no | +| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no | diff --git a/datamodels/association/aggregator_knowledge_source.html b/datamodels/association/aggregator_knowledge_source.html index e8127dd32..4fa62c2bb 100644 --- a/datamodels/association/aggregator_knowledge_source.html +++ b/datamodels/association/aggregator_knowledge_source.html @@ -98,24 +98,24 @@

Applicable Classes

PositiveOrNegativeAssociation

-

+

Association

+

A generic association between a thing (subject) and another thing (object)

no

-

ParserConfiguration

-

Settings that determine behavior when parsing associations

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

no

-

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

+

AssociationChange

+

A change object describing a change between two associations

no

-

Association

-

A generic association between a thing (subject) and another thing (object)

+

PositiveOrNegativeAssociation

+

no

-

AssociationChange

-

A change object describing a change between two associations

+

ParserConfiguration

+

Settings that determine behavior when parsing associations

no

diff --git a/datamodels/association/comments.html b/datamodels/association/comments.html index b7e3d882d..6f998d70c 100644 --- a/datamodels/association/comments.html +++ b/datamodels/association/comments.html @@ -98,18 +98,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/evidence_type.html b/datamodels/association/evidence_type.html index 9354ef908..4893bff1f 100644 --- a/datamodels/association/evidence_type.html +++ b/datamodels/association/evidence_type.html @@ -98,18 +98,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/negated.html b/datamodels/association/negated.html index 0aa522beb..c3281c9ce 100644 --- a/datamodels/association/negated.html +++ b/datamodels/association/negated.html @@ -98,18 +98,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

yes

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

yes

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

yes

+ diff --git a/datamodels/association/object.html b/datamodels/association/object.html index b326a60fe..548d6c2eb 100644 --- a/datamodels/association/object.html +++ b/datamodels/association/object.html @@ -110,20 +110,20 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

+

Association

+

A generic association between a thing (subject) and another thing (object)

no

-

Association

-

A generic association between a thing (subject) and another thing (object)

+

PositiveOrNegativeAssociation

+

no

-

PropertyValue

-

A generic tag-value that can be associated with an association

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

-

+

PropertyValue

+

A generic tag-value that can be associated with an association

no

diff --git a/datamodels/association/object_closure.html b/datamodels/association/object_closure.html index b53c02cdd..5771d40a2 100644 --- a/datamodels/association/object_closure.html +++ b/datamodels/association/object_closure.html @@ -98,18 +98,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/object_closure_label.html b/datamodels/association/object_closure_label.html index 405845ec2..011dd66a0 100644 --- a/datamodels/association/object_closure_label.html +++ b/datamodels/association/object_closure_label.html @@ -98,18 +98,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/object_label.html b/datamodels/association/object_label.html index 8b83fb8aa..80f7468f1 100644 --- a/datamodels/association/object_label.html +++ b/datamodels/association/object_label.html @@ -103,18 +103,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/predicate.html b/datamodels/association/predicate.html index 42b62db90..a0416cf59 100644 --- a/datamodels/association/predicate.html +++ b/datamodels/association/predicate.html @@ -108,20 +108,20 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

+

Association

+

A generic association between a thing (subject) and another thing (object)

no

-

Association

-

A generic association between a thing (subject) and another thing (object)

+

PositiveOrNegativeAssociation

+

no

-

PropertyValue

-

A generic tag-value that can be associated with an association

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

-

+

PropertyValue

+

A generic tag-value that can be associated with an association

no

diff --git a/datamodels/association/predicate_label.html b/datamodels/association/predicate_label.html index fb445fd85..c91d40a26 100644 --- a/datamodels/association/predicate_label.html +++ b/datamodels/association/predicate_label.html @@ -103,18 +103,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/primary_knowledge_source.html b/datamodels/association/primary_knowledge_source.html index 6ce1a3812..9b3613a45 100644 --- a/datamodels/association/primary_knowledge_source.html +++ b/datamodels/association/primary_knowledge_source.html @@ -98,24 +98,24 @@

Applicable Classes

PositiveOrNegativeAssociation

-

+

Association

+

A generic association between a thing (subject) and another thing (object)

no

-

ParserConfiguration

-

Settings that determine behavior when parsing associations

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

no

-

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

+

AssociationChange

+

A change object describing a change between two associations

no

-

Association

-

A generic association between a thing (subject) and another thing (object)

+

PositiveOrNegativeAssociation

+

no

-

AssociationChange

-

A change object describing a change between two associations

+

ParserConfiguration

+

Settings that determine behavior when parsing associations

no

diff --git a/datamodels/association/property_values.html b/datamodels/association/property_values.html index 526d41212..01ad6de8d 100644 --- a/datamodels/association/property_values.html +++ b/datamodels/association/property_values.html @@ -98,18 +98,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/publications.html b/datamodels/association/publications.html index 157e15c33..4d2fc70c9 100644 --- a/datamodels/association/publications.html +++ b/datamodels/association/publications.html @@ -98,14 +98,6 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

AssociationChange

-

A change object describing a change between two associations

-

no

-

Association

A generic association between a thing (subject) and another thing (object)

no

@@ -114,6 +106,14 @@

Applicable Classes

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ +

AssociationChange

+

A change object describing a change between two associations

+

no

+ diff --git a/datamodels/association/subject.html b/datamodels/association/subject.html index 38a2dd6ff..3d87674e7 100644 --- a/datamodels/association/subject.html +++ b/datamodels/association/subject.html @@ -98,14 +98,6 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

AssociationChange

-

A change object describing a change between two associations

-

no

-

Association

A generic association between a thing (subject) and another thing (object)

no

@@ -114,6 +106,14 @@

Applicable Classes

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ +

AssociationChange

+

A change object describing a change between two associations

+

no

+ diff --git a/datamodels/association/subject_closure.html b/datamodels/association/subject_closure.html index 1ed794c3c..e90a27cda 100644 --- a/datamodels/association/subject_closure.html +++ b/datamodels/association/subject_closure.html @@ -98,18 +98,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/subject_closure_label.html b/datamodels/association/subject_closure_label.html index 6a52723c6..bb9522c32 100644 --- a/datamodels/association/subject_closure_label.html +++ b/datamodels/association/subject_closure_label.html @@ -98,18 +98,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/subject_label.html b/datamodels/association/subject_label.html index 3faa1630c..0d04219e3 100644 --- a/datamodels/association/subject_label.html +++ b/datamodels/association/subject_label.html @@ -103,18 +103,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/association/supporting_objects.html b/datamodels/association/supporting_objects.html index a2f4836ab..2b6c6e552 100644 --- a/datamodels/association/supporting_objects.html +++ b/datamodels/association/supporting_objects.html @@ -98,18 +98,18 @@

Applicable Classes

NegatedAssociation

-

A negated association between a thing (subject) and another thing (object)

-

no

- -

Association

+

Association

A generic association between a thing (subject) and another thing (object)

no

-

PositiveOrNegativeAssociation

+

PositiveOrNegativeAssociation

no

+

NegatedAssociation

+

A negated association between a thing (subject) and another thing (object)

+

no

+ diff --git a/datamodels/mapping-rules/rules.html b/datamodels/mapping-rules/rules.html index 87e8f7260..fc8eaf9c0 100644 --- a/datamodels/mapping-rules/rules.html +++ b/datamodels/mapping-rules/rules.html @@ -97,12 +97,12 @@

Applicable Classes

RuleSet

-

A set of rules for generating synonyms or alternate lexical elements

+

MappingRuleCollection

+

A collection of mapping rules

no

-

MappingRuleCollection

-

A collection of mapping rules

+

RuleSet

+

A set of rules for generating synonyms or alternate lexical elements

no

diff --git a/datamodels/obograph/id.html b/datamodels/obograph/id.html index 4e7598fc2..cf300e289 100644 --- a/datamodels/obograph/id.html +++ b/datamodels/obograph/id.html @@ -98,20 +98,20 @@

Applicable Classes

Graph

-

A graph is a collection of nodes and edges and other axioms that represents a…

+

SubsetDefinition

+

no

-

Node

-

A node is a class, property, or other entity in an ontology

+

Graph

+

A graph is a collection of nodes and edges and other axioms that represents a…

no

-

SubsetDefinition

+

SynonymTypeDefinition

no

-

SynonymTypeDefinition

-

+

Node

+

A node is a class, property, or other entity in an ontology

no

diff --git a/datamodels/obograph/lang.html b/datamodels/obograph/lang.html index 5c81ab022..4f6c381c6 100644 --- a/datamodels/obograph/lang.html +++ b/datamodels/obograph/lang.html @@ -98,24 +98,24 @@

Applicable Classes

PropertyValue

-

A generic grouping for the different kinds of key-value associations on objec…

+

SynonymPropertyValue

+

A property value that represents an assertion about a synonym of an entity

no

-

SynonymPropertyValue

-

A property value that represents an assertion about a synonym of an entity

+

XrefPropertyValue

+

A property value that represents an assertion about an external reference to …

no

DefinitionPropertyValue

A property value that represents an assertion about the textual definition of…

no

-

BasicPropertyValue

-

A property value that represents an assertion about an entity that is not a d…

+

PropertyValue

+

A generic grouping for the different kinds of key-value associations on objec…

no

-

XrefPropertyValue

-

A property value that represents an assertion about an external reference to …

+

BasicPropertyValue

+

A property value that represents an assertion about an entity that is not a d…

no

diff --git a/datamodels/obograph/lbl.html b/datamodels/obograph/lbl.html index 505ccd67d..ac9eb306b 100644 --- a/datamodels/obograph/lbl.html +++ b/datamodels/obograph/lbl.html @@ -98,20 +98,20 @@

Applicable Classes

Graph

-

A graph is a collection of nodes and edges and other axioms that represents a…

+

SubsetDefinition

+

no

-

Node

-

A node is a class, property, or other entity in an ontology

+

Graph

+

A graph is a collection of nodes and edges and other axioms that represents a…

no

-

SubsetDefinition

+

SynonymTypeDefinition

no

-

SynonymTypeDefinition

-

+

Node

+

A node is a class, property, or other entity in an ontology

no

diff --git a/datamodels/obograph/meta.html b/datamodels/obograph/meta.html index 4e44df468..89b0ebe3f 100644 --- a/datamodels/obograph/meta.html +++ b/datamodels/obograph/meta.html @@ -98,60 +98,60 @@

Applicable Classes

PropertyValue

-

A generic grouping for the different kinds of key-value associations on objec…

+

Graph

+

A graph is a collection of nodes and edges and other axioms that represents a…

no

-

LogicalDefinitionAxiom

-

An axiom that defines a class in terms of a genus or set of genus classes and…

+

SynonymPropertyValue

+

A property value that represents an assertion about a synonym of an entity

no

-

PropertyChainAxiom

-

An axiom that represents an OWL property chain, e

+

DefinitionPropertyValue

+

A property value that represents an assertion about the textual definition of…

no

-

GraphDocument

-

A graph document is a collection of graphs together with a set of prefixes th…

+

XrefPropertyValue

+

A property value that represents an assertion about an external reference to …

no

-

SynonymPropertyValue

-

A property value that represents an assertion about a synonym of an entity

+

Node

+

A node is a class, property, or other entity in an ontology

no

EquivalentNodesSet

A clique of nodes that are all mutually equivalent

no

-

DefinitionPropertyValue

-

A property value that represents an assertion about the textual definition of…

+

Edge

+

An edge is a simple typed relationship between two nodes

no

-

Graph

-

A graph is a collection of nodes and edges and other axioms that represents a…

+

DisjointClassExpressionsAxiom

+

An axiom that defines a set of classes or class expressions as being mutually…

no

-

BasicPropertyValue

-

A property value that represents an assertion about an entity that is not a d…

+

PropertyValue

+

A generic grouping for the different kinds of key-value associations on objec…

no

-

Node

-

A node is a class, property, or other entity in an ontology

+

Axiom

+

A generic grouping for any OWL axiom or group of axioms that is not captured …

no

-

Axiom

-

A generic grouping for any OWL axiom or group of axioms that is not captured …

+

LogicalDefinitionAxiom

+

An axiom that defines a class in terms of a genus or set of genus classes and…

no

-

Edge

-

An edge is a simple typed relationship between two nodes

+

PropertyChainAxiom

+

An axiom that represents an OWL property chain, e

no

-

DisjointClassExpressionsAxiom

-

An axiom that defines a set of classes or class expressions as being mutually…

+

GraphDocument

+

A graph document is a collection of graphs together with a set of prefixes th…

no

-

XrefPropertyValue

-

A property value that represents an assertion about an external reference to …

+

BasicPropertyValue

+

A property value that represents an assertion about an entity that is not a d…

no

DomainRangeAxiom

diff --git a/datamodels/obograph/pred.html b/datamodels/obograph/pred.html index 6d31b3a4c..83b732d3c 100644 --- a/datamodels/obograph/pred.html +++ b/datamodels/obograph/pred.html @@ -98,32 +98,32 @@

Applicable Classes

PropertyValue

-

A generic grouping for the different kinds of key-value associations on objec…

-

no

- -

SynonymPropertyValue

+

SynonymPropertyValue

A property value that represents an assertion about a synonym of an entity

yes

-

SynonymTypeDefinition

-

-

no

-

DefinitionPropertyValue

A property value that represents an assertion about the textual definition of…

no

-

BasicPropertyValue

-

A property value that represents an assertion about an entity that is not a d…

+

XrefPropertyValue

+

A property value that represents an assertion about an external reference to …

no

Edge

An edge is a simple typed relationship between two nodes

no

-

XrefPropertyValue

-

A property value that represents an assertion about an external reference to …

+

PropertyValue

+

A generic grouping for the different kinds of key-value associations on objec…

+

no

+ +

SynonymTypeDefinition

+

+

no

+ +

BasicPropertyValue

+

A property value that represents an assertion about an entity that is not a d…

no

diff --git a/datamodels/obograph/val.html b/datamodels/obograph/val.html index 0ffe82662..adc59e4d3 100644 --- a/datamodels/obograph/val.html +++ b/datamodels/obograph/val.html @@ -98,25 +98,25 @@

Applicable Classes

PropertyValue

-

A generic grouping for the different kinds of key-value associations on objec…

-

no

- -

SynonymPropertyValue

+

SynonymPropertyValue

A property value that represents an assertion about a synonym of an entity

yes

+

XrefPropertyValue

+

A property value that represents an assertion about an external reference to …

+

yes

+

DefinitionPropertyValue

A property value that represents an assertion about the textual definition of…

yes

-

BasicPropertyValue

-

A property value that represents an assertion about an entity that is not a d…

+

PropertyValue

+

A generic grouping for the different kinds of key-value associations on objec…

no

-

XrefPropertyValue

-

A property value that represents an assertion about an external reference to …

-

yes

+

BasicPropertyValue

+

A property value that represents an assertion about an entity that is not a d…

+

no

diff --git a/datamodels/obograph/valType.html b/datamodels/obograph/valType.html index 103212626..e9917ce37 100644 --- a/datamodels/obograph/valType.html +++ b/datamodels/obograph/valType.html @@ -98,24 +98,24 @@

Applicable Classes

PropertyValue

-

A generic grouping for the different kinds of key-value associations on objec…

+

SynonymPropertyValue

+

A property value that represents an assertion about a synonym of an entity

no

-

SynonymPropertyValue

-

A property value that represents an assertion about a synonym of an entity

+

XrefPropertyValue

+

A property value that represents an assertion about an external reference to …

no

DefinitionPropertyValue

A property value that represents an assertion about the textual definition of…

no

-

BasicPropertyValue

-

A property value that represents an assertion about an entity that is not a d…

+

PropertyValue

+

A generic grouping for the different kinds of key-value associations on objec…

no

-

XrefPropertyValue

-

A property value that represents an assertion about an external reference to …

+

BasicPropertyValue

+

A property value that represents an assertion about an entity that is not a d…

no

diff --git a/datamodels/obograph/xrefs.html b/datamodels/obograph/xrefs.html index 459c5bc42..643d9dd35 100644 --- a/datamodels/obograph/xrefs.html +++ b/datamodels/obograph/xrefs.html @@ -98,28 +98,28 @@

Applicable Classes

PropertyValue

-

A generic grouping for the different kinds of key-value associations on objec…

-

no

- -

Meta

-

A collection of annotations on an entity or ontology or edge or axiom

-

yes

-

SynonymPropertyValue

A property value that represents an assertion about a synonym of an entity

no

-

DefinitionPropertyValue

+

XrefPropertyValue

+

A property value that represents an assertion about an external reference to …

+

no

+ +

DefinitionPropertyValue

A property value that represents an assertion about the textual definition of…

yes

-

BasicPropertyValue

-

A property value that represents an assertion about an entity that is not a d…

+

Meta

+

A collection of annotations on an entity or ontology or edge or axiom

+

yes

+ +

PropertyValue

+

A generic grouping for the different kinds of key-value associations on objec…

no

-

XrefPropertyValue

-

A property value that represents an assertion about an external reference to …

+

BasicPropertyValue

+

A property value that represents an assertion about an entity that is not a d…

no

diff --git a/datamodels/ontology-metadata/IEDB_alternative_term.html b/datamodels/ontology-metadata/IEDB_alternative_term.html index d96220125..6a8ede77f 100644 --- a/datamodels/ontology-metadata/IEDB_alternative_term.html +++ b/datamodels/ontology-metadata/IEDB_alternative_term.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasSynonyms

-

a mixin for a class whose members can have synonyms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasSynonyms

+

a mixin for a class whose members can have synonyms

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/ISA_alternative_term.html b/datamodels/ontology-metadata/ISA_alternative_term.html index b47af5cd4..d2b7a7a7d 100644 --- a/datamodels/ontology-metadata/ISA_alternative_term.html +++ b/datamodels/ontology-metadata/ISA_alternative_term.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasSynonyms

-

a mixin for a class whose members can have synonyms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasSynonyms

+

a mixin for a class whose members can have synonyms

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/OBO_foundry_unique_label.html b/datamodels/ontology-metadata/OBO_foundry_unique_label.html index 9a914d2c1..976846b61 100644 --- a/datamodels/ontology-metadata/OBO_foundry_unique_label.html +++ b/datamodels/ontology-metadata/OBO_foundry_unique_label.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasSynonyms

-

a mixin for a class whose members can have synonyms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasSynonyms

+

a mixin for a class whose members can have synonyms

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/alternative_term.html b/datamodels/ontology-metadata/alternative_term.html index 0d6f7a56f..80f255a93 100644 --- a/datamodels/ontology-metadata/alternative_term.html +++ b/datamodels/ontology-metadata/alternative_term.html @@ -110,52 +110,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasSynonyms

-

a mixin for a class whose members can have synonyms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasSynonyms

+

a mixin for a class whose members can have synonyms

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/broadMatch.html b/datamodels/ontology-metadata/broadMatch.html index 328d98cd9..5dfb6d59c 100644 --- a/datamodels/ontology-metadata/broadMatch.html +++ b/datamodels/ontology-metadata/broadMatch.html @@ -106,54 +106,54 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

-

no

- -

Property

-

-

yes

- -

HasMappings

-

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

AnnotationProperty

A property used in non-logical axioms

no

-

Agent

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

NamedIndividual

-

An instance that has a IRI

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

NamedIndividual

+

An instance that has a IRI

no

-

Subset

-

A collection of terms grouped for some purpose

+

Image

+

no

-

Class

+

Property

yes

-

Image

+

HasMappings

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

-

no

+

Class

+

+

yes

HomoSapiens

An individual human being

no

+

Agent

+

+

no

+ +

Subset

+

A collection of terms grouped for some purpose

+

no

+ diff --git a/datamodels/ontology-metadata/cardinality.html b/datamodels/ontology-metadata/cardinality.html index c98e915f4..afdfe059a 100644 --- a/datamodels/ontology-metadata/cardinality.html +++ b/datamodels/ontology-metadata/cardinality.html @@ -106,7 +106,7 @@

Applicable Classes

ClassExpression

+

Class

no

@@ -114,7 +114,7 @@

Applicable Classes

Class

+

ClassExpression

no

diff --git a/datamodels/ontology-metadata/category.html b/datamodels/ontology-metadata/category.html index 73d57f2df..f430dcd2b 100644 --- a/datamodels/ontology-metadata/category.html +++ b/datamodels/ontology-metadata/category.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

+

HasCategory

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HomoSapiens

+

An individual human being

no

-

HasCategory

+

Agent

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/closeMatch.html b/datamodels/ontology-metadata/closeMatch.html index d57a0eccd..6fc23204e 100644 --- a/datamodels/ontology-metadata/closeMatch.html +++ b/datamodels/ontology-metadata/closeMatch.html @@ -106,54 +106,54 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

-

no

- -

Property

-

-

yes

- -

HasMappings

-

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

AnnotationProperty

A property used in non-logical axioms

no

-

Agent

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

NamedIndividual

-

An instance that has a IRI

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

NamedIndividual

+

An instance that has a IRI

no

-

Subset

-

A collection of terms grouped for some purpose

+

Image

+

no

-

Class

+

Property

yes

-

Image

+

HasMappings

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

-

no

+

Class

+

+

yes

HomoSapiens

An individual human being

no

+

Agent

+

+

no

+ +

Subset

+

A collection of terms grouped for some purpose

+

no

+ diff --git a/datamodels/ontology-metadata/comment.html b/datamodels/ontology-metadata/comment.html index 32f532960..6c1f57b98 100644 --- a/datamodels/ontology-metadata/comment.html +++ b/datamodels/ontology-metadata/comment.html @@ -106,60 +106,60 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Axiom

-

A logical or non-logical statement

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Axiom

+

A logical or non-logical statement

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

Ontology

-

An OWL ontology

+

Agent

+

no

HasUserInformation

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

Ontology

+

An OWL ontology

no

diff --git a/datamodels/ontology-metadata/complementOf.html b/datamodels/ontology-metadata/complementOf.html index 24f46c1fa..469ae1ebe 100644 --- a/datamodels/ontology-metadata/complementOf.html +++ b/datamodels/ontology-metadata/complementOf.html @@ -106,7 +106,7 @@

Applicable Classes

ClassExpression

+

Class

no

@@ -114,7 +114,7 @@

Applicable Classes

Class

+

ClassExpression

no

diff --git a/datamodels/ontology-metadata/conformsTo.html b/datamodels/ontology-metadata/conformsTo.html index 6526c17f8..2d58bf422 100644 --- a/datamodels/ontology-metadata/conformsTo.html +++ b/datamodels/ontology-metadata/conformsTo.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

+

HasCategory

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HomoSapiens

+

An individual human being

no

-

HasCategory

+

Agent

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/consider.html b/datamodels/ontology-metadata/consider.html index ebb59fb28..01f911aef 100644 --- a/datamodels/ontology-metadata/consider.html +++ b/datamodels/ontology-metadata/consider.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasLifeCycle

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Class

+

no

-

Class

-

+

HomoSapiens

+

An individual human being

no

-

Image

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

HasLifeCycle

+

no

diff --git a/datamodels/ontology-metadata/contributor.html b/datamodels/ontology-metadata/contributor.html index 54643d68f..5b830a3ad 100644 --- a/datamodels/ontology-metadata/contributor.html +++ b/datamodels/ontology-metadata/contributor.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/created.html b/datamodels/ontology-metadata/created.html index aa644a2ff..63991892a 100644 --- a/datamodels/ontology-metadata/created.html +++ b/datamodels/ontology-metadata/created.html @@ -107,56 +107,56 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

Ontology

-

An OWL ontology

+

Agent

+

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

Ontology

+

An OWL ontology

no

diff --git a/datamodels/ontology-metadata/created_by.html b/datamodels/ontology-metadata/created_by.html index 5c0749eee..fc1cac39d 100644 --- a/datamodels/ontology-metadata/created_by.html +++ b/datamodels/ontology-metadata/created_by.html @@ -106,27 +106,27 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

@@ -134,28 +134,28 @@

Applicable Classes

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/creation_date.html b/datamodels/ontology-metadata/creation_date.html index d710ddfc9..9230a9c0b 100644 --- a/datamodels/ontology-metadata/creation_date.html +++ b/datamodels/ontology-metadata/creation_date.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/creator.html b/datamodels/ontology-metadata/creator.html index 02b0e4357..06841c686 100644 --- a/datamodels/ontology-metadata/creator.html +++ b/datamodels/ontology-metadata/creator.html @@ -106,56 +106,56 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

Ontology

-

An OWL ontology

+

Agent

+

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

Ontology

+

An OWL ontology

no

diff --git a/datamodels/ontology-metadata/curator_note.html b/datamodels/ontology-metadata/curator_note.html index 52bcf8e4e..a8c373cef 100644 --- a/datamodels/ontology-metadata/curator_note.html +++ b/datamodels/ontology-metadata/curator_note.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

HasUserInformation

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HasUserInformation

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/database_cross_reference.html b/datamodels/ontology-metadata/database_cross_reference.html index d7be0881a..326307e73 100644 --- a/datamodels/ontology-metadata/database_cross_reference.html +++ b/datamodels/ontology-metadata/database_cross_reference.html @@ -106,56 +106,56 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasMappings

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

Axiom

A logical or non-logical statement

yes

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasMappings

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/date.html b/datamodels/ontology-metadata/date.html index 03b807d09..febf10ad2 100644 --- a/datamodels/ontology-metadata/date.html +++ b/datamodels/ontology-metadata/date.html @@ -107,52 +107,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/definition.html b/datamodels/ontology-metadata/definition.html index cadaa16a7..c237c9f03 100644 --- a/datamodels/ontology-metadata/definition.html +++ b/datamodels/ontology-metadata/definition.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

-

yes

- -

AnnotationProperty

+

AnnotationProperty

A property used in non-logical axioms

no

-

Agent

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

+

no

+ +

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

-

no

+

Property

+

+

yes

Class

yes

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

HasMinimalMetadata

-

Absolute minimum metadata model

+

Agent

+

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HasMinimalMetadata

+

Absolute minimum metadata model

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/definition_source.html b/datamodels/ontology-metadata/definition_source.html index 1c78e3b42..50a2e09ad 100644 --- a/datamodels/ontology-metadata/definition_source.html +++ b/datamodels/ontology-metadata/definition_source.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/depicted_by.html b/datamodels/ontology-metadata/depicted_by.html index 0341d7453..3e2b28951 100644 --- a/datamodels/ontology-metadata/depicted_by.html +++ b/datamodels/ontology-metadata/depicted_by.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

HasUserInformation

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HasUserInformation

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/deprecated.html b/datamodels/ontology-metadata/deprecated.html index 74bdb3838..bf1211da3 100644 --- a/datamodels/ontology-metadata/deprecated.html +++ b/datamodels/ontology-metadata/deprecated.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasLifeCycle

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Class

+

no

-

Class

-

+

HomoSapiens

+

An individual human being

no

-

Image

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

HasLifeCycle

+

no

diff --git a/datamodels/ontology-metadata/disjointWith.html b/datamodels/ontology-metadata/disjointWith.html index b5ca6d961..cb23ef319 100644 --- a/datamodels/ontology-metadata/disjointWith.html +++ b/datamodels/ontology-metadata/disjointWith.html @@ -106,16 +106,16 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

PropertyExpression

+

no

-

PropertyExpression

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

ClassExpression

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

Restriction

@@ -126,8 +126,8 @@

Applicable Classes

ObjectProperty

-

A property that connects two objects in logical axioms

+

ClassExpression

+

no

diff --git a/datamodels/ontology-metadata/domain.html b/datamodels/ontology-metadata/domain.html index 0ecb2a65b..6ceadce7c 100644 --- a/datamodels/ontology-metadata/domain.html +++ b/datamodels/ontology-metadata/domain.html @@ -110,20 +110,20 @@

Applicable Classes

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/editor_note.html b/datamodels/ontology-metadata/editor_note.html index 468dedd41..1b7b3bc0c 100644 --- a/datamodels/ontology-metadata/editor_note.html +++ b/datamodels/ontology-metadata/editor_note.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/editor_preferred_term.html b/datamodels/ontology-metadata/editor_preferred_term.html index 24fbb8726..df72154c9 100644 --- a/datamodels/ontology-metadata/editor_preferred_term.html +++ b/datamodels/ontology-metadata/editor_preferred_term.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasSynonyms

-

a mixin for a class whose members can have synonyms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasSynonyms

+

a mixin for a class whose members can have synonyms

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/equivalentClass.html b/datamodels/ontology-metadata/equivalentClass.html index 61beed78f..be1cb8bf4 100644 --- a/datamodels/ontology-metadata/equivalentClass.html +++ b/datamodels/ontology-metadata/equivalentClass.html @@ -106,7 +106,7 @@

Applicable Classes

ClassExpression

+

Class

no

@@ -114,7 +114,7 @@

Applicable Classes

Class

+

ClassExpression

no

diff --git a/datamodels/ontology-metadata/equivalentProperty.html b/datamodels/ontology-metadata/equivalentProperty.html index 451e15e20..8cee0699e 100644 --- a/datamodels/ontology-metadata/equivalentProperty.html +++ b/datamodels/ontology-metadata/equivalentProperty.html @@ -106,12 +106,12 @@

Applicable Classes

ObjectProperty

-

A property that connects two objects in logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

diff --git a/datamodels/ontology-metadata/exactMatch.html b/datamodels/ontology-metadata/exactMatch.html index 81651ae29..0a89b84d7 100644 --- a/datamodels/ontology-metadata/exactMatch.html +++ b/datamodels/ontology-metadata/exactMatch.html @@ -106,54 +106,54 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

-

no

- -

Property

-

-

yes

- -

HasMappings

-

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

AnnotationProperty

A property used in non-logical axioms

no

-

Agent

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

NamedIndividual

-

An instance that has a IRI

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

NamedIndividual

+

An instance that has a IRI

no

-

Subset

-

A collection of terms grouped for some purpose

+

Image

+

no

-

Class

+

Property

yes

-

Image

+

HasMappings

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

-

no

+

Class

+

+

yes

HomoSapiens

An individual human being

no

+

Agent

+

+

no

+ +

Subset

+

A collection of terms grouped for some purpose

+

no

+ diff --git a/datamodels/ontology-metadata/example_of_usage.html b/datamodels/ontology-metadata/example_of_usage.html index 5effc1245..12d2fb877 100644 --- a/datamodels/ontology-metadata/example_of_usage.html +++ b/datamodels/ontology-metadata/example_of_usage.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

HasUserInformation

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HasUserInformation

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/excluded_from_QC_check.html b/datamodels/ontology-metadata/excluded_from_QC_check.html index dc55c57e0..34ab8c7a9 100644 --- a/datamodels/ontology-metadata/excluded_from_QC_check.html +++ b/datamodels/ontology-metadata/excluded_from_QC_check.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasLifeCycle

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Class

+

no

-

Class

-

+

HomoSapiens

+

An individual human being

no

-

Image

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

HasLifeCycle

+

no

diff --git a/datamodels/ontology-metadata/excluded_subClassOf.html b/datamodels/ontology-metadata/excluded_subClassOf.html index fd2761405..6d396a904 100644 --- a/datamodels/ontology-metadata/excluded_subClassOf.html +++ b/datamodels/ontology-metadata/excluded_subClassOf.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasLifeCycle

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Class

+

no

-

Class

-

+

HomoSapiens

+

An individual human being

no

-

Image

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

HasLifeCycle

+

no

diff --git a/datamodels/ontology-metadata/excluded_synonym.html b/datamodels/ontology-metadata/excluded_synonym.html index 596c768c2..80e7614ad 100644 --- a/datamodels/ontology-metadata/excluded_synonym.html +++ b/datamodels/ontology-metadata/excluded_synonym.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasLifeCycle

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Class

+

no

-

Class

-

+

HomoSapiens

+

An individual human being

no

-

Image

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

HasLifeCycle

+

no

diff --git a/datamodels/ontology-metadata/has_alternative_id.html b/datamodels/ontology-metadata/has_alternative_id.html index 1fafbec83..dac56508a 100644 --- a/datamodels/ontology-metadata/has_alternative_id.html +++ b/datamodels/ontology-metadata/has_alternative_id.html @@ -107,52 +107,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasLifeCycle

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Class

+

no

-

Class

-

+

HomoSapiens

+

An individual human being

no

-

Image

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

HasLifeCycle

+

no

diff --git a/datamodels/ontology-metadata/has_broad_synonym.html b/datamodels/ontology-metadata/has_broad_synonym.html index 0cb8fda85..fbfa5971a 100644 --- a/datamodels/ontology-metadata/has_broad_synonym.html +++ b/datamodels/ontology-metadata/has_broad_synonym.html @@ -110,52 +110,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasSynonyms

-

a mixin for a class whose members can have synonyms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasSynonyms

+

a mixin for a class whose members can have synonyms

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/has_curation_status.html b/datamodels/ontology-metadata/has_curation_status.html index 5dad9989f..d0eaf5094 100644 --- a/datamodels/ontology-metadata/has_curation_status.html +++ b/datamodels/ontology-metadata/has_curation_status.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

HasUserInformation

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HasUserInformation

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/has_exact_synonym.html b/datamodels/ontology-metadata/has_exact_synonym.html index a6891e5ca..adcb8f82c 100644 --- a/datamodels/ontology-metadata/has_exact_synonym.html +++ b/datamodels/ontology-metadata/has_exact_synonym.html @@ -110,56 +110,56 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasSynonyms

-

a mixin for a class whose members can have synonyms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

Axiom

A logical or non-logical statement

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasSynonyms

+

a mixin for a class whose members can have synonyms

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/has_narrow_synonym.html b/datamodels/ontology-metadata/has_narrow_synonym.html index 6a059fbff..0134d0ae4 100644 --- a/datamodels/ontology-metadata/has_narrow_synonym.html +++ b/datamodels/ontology-metadata/has_narrow_synonym.html @@ -110,52 +110,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasSynonyms

-

a mixin for a class whose members can have synonyms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasSynonyms

+

a mixin for a class whose members can have synonyms

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/has_obo_namespace.html b/datamodels/ontology-metadata/has_obo_namespace.html index 694dd4ebb..19afeedae 100644 --- a/datamodels/ontology-metadata/has_obo_namespace.html +++ b/datamodels/ontology-metadata/has_obo_namespace.html @@ -97,52 +97,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

+

HasCategory

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HomoSapiens

+

An individual human being

no

-

HasCategory

+

Agent

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/has_obsolescence_reason.html b/datamodels/ontology-metadata/has_obsolescence_reason.html index 21c3ff67d..8af0051e1 100644 --- a/datamodels/ontology-metadata/has_obsolescence_reason.html +++ b/datamodels/ontology-metadata/has_obsolescence_reason.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasLifeCycle

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Class

+

no

-

Class

-

+

HomoSapiens

+

An individual human being

no

-

Image

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

HasLifeCycle

+

no

diff --git a/datamodels/ontology-metadata/has_related_synonym.html b/datamodels/ontology-metadata/has_related_synonym.html index 640104094..f31be5e07 100644 --- a/datamodels/ontology-metadata/has_related_synonym.html +++ b/datamodels/ontology-metadata/has_related_synonym.html @@ -97,52 +97,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

HasSynonyms

-

a mixin for a class whose members can have synonyms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

+

NamedIndividual

+

An instance that has a IRI

no

-

NamedIndividual

-

An instance that has a IRI

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

HasSynonyms

+

a mixin for a class whose members can have synonyms

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/id.html b/datamodels/ontology-metadata/id.html index 4460a66ba..fdb1d278a 100644 --- a/datamodels/ontology-metadata/id.html +++ b/datamodels/ontology-metadata/id.html @@ -107,57 +107,57 @@

Applicable Classes

NamedObject

-

Anything with an IRI

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

Property

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Agent

-

-

yes

- -

NamedIndividual

+

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

-

Class

+

Class

no

-

Image

+

HomoSapiens

+

An individual human being

+

yes

+ +

Agent

-

no

+

yes

-

Ontology

-

An OWL ontology

+

Subset

+

A collection of terms grouped for some purpose

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

NamedObject

+

Anything with an IRI

no

-

HomoSapiens

-

An individual human being

-

yes

+

Ontology

+

An OWL ontology

+

no

diff --git a/datamodels/ontology-metadata/image.html b/datamodels/ontology-metadata/image.html index 767551c5f..cd7d2f118 100644 --- a/datamodels/ontology-metadata/image.html +++ b/datamodels/ontology-metadata/image.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

HasUserInformation

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HasUserInformation

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/imported_from.html b/datamodels/ontology-metadata/imported_from.html index 5a009e339..53b27860d 100644 --- a/datamodels/ontology-metadata/imported_from.html +++ b/datamodels/ontology-metadata/imported_from.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/in_subset.html b/datamodels/ontology-metadata/in_subset.html index d2e4f9ef2..11e5d5d22 100644 --- a/datamodels/ontology-metadata/in_subset.html +++ b/datamodels/ontology-metadata/in_subset.html @@ -98,52 +98,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

+

HasCategory

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HomoSapiens

+

An individual human being

no

-

HasCategory

+

Agent

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/intersectionOf.html b/datamodels/ontology-metadata/intersectionOf.html index ea8a9e42b..4e8909bea 100644 --- a/datamodels/ontology-metadata/intersectionOf.html +++ b/datamodels/ontology-metadata/intersectionOf.html @@ -106,7 +106,7 @@

Applicable Classes

ClassExpression

+

Class

no

@@ -114,7 +114,7 @@

Applicable Classes

Class

+

ClassExpression

no

diff --git a/datamodels/ontology-metadata/inverseOf.html b/datamodels/ontology-metadata/inverseOf.html index 4bf8924b9..cb7019b24 100644 --- a/datamodels/ontology-metadata/inverseOf.html +++ b/datamodels/ontology-metadata/inverseOf.html @@ -106,12 +106,12 @@

Applicable Classes

ObjectProperty

-

A property that connects two objects in logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

diff --git a/datamodels/ontology-metadata/isDefinedBy.html b/datamodels/ontology-metadata/isDefinedBy.html index 84bf509e6..2851a55b8 100644 --- a/datamodels/ontology-metadata/isDefinedBy.html +++ b/datamodels/ontology-metadata/isDefinedBy.html @@ -97,52 +97,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/is_class_level.html b/datamodels/ontology-metadata/is_class_level.html index ee3c737ed..a97b48bdf 100644 --- a/datamodels/ontology-metadata/is_class_level.html +++ b/datamodels/ontology-metadata/is_class_level.html @@ -101,20 +101,20 @@

Applicable Classes

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/is_cyclic.html b/datamodels/ontology-metadata/is_cyclic.html index 948e81194..f8e9d38a4 100644 --- a/datamodels/ontology-metadata/is_cyclic.html +++ b/datamodels/ontology-metadata/is_cyclic.html @@ -97,12 +97,12 @@

Applicable Classes

ObjectProperty

-

A property that connects two objects in logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

diff --git a/datamodels/ontology-metadata/is_metadata_tag.html b/datamodels/ontology-metadata/is_metadata_tag.html index 5ffbf61ea..2b940f136 100644 --- a/datamodels/ontology-metadata/is_metadata_tag.html +++ b/datamodels/ontology-metadata/is_metadata_tag.html @@ -101,20 +101,20 @@

Applicable Classes

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/is_transitive.html b/datamodels/ontology-metadata/is_transitive.html index 648813373..e0dcdc7f2 100644 --- a/datamodels/ontology-metadata/is_transitive.html +++ b/datamodels/ontology-metadata/is_transitive.html @@ -97,12 +97,12 @@

Applicable Classes

ObjectProperty

-

A property that connects two objects in logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

diff --git a/datamodels/ontology-metadata/label.html b/datamodels/ontology-metadata/label.html index 0d99cf422..bd35d7fbe 100644 --- a/datamodels/ontology-metadata/label.html +++ b/datamodels/ontology-metadata/label.html @@ -106,56 +106,56 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

-

yes

- -

AnnotationProperty

+

AnnotationProperty

A property used in non-logical axioms

no

-

Agent

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

+

no

+ +

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Axiom

-

A logical or non-logical statement

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Axiom

+

A logical or non-logical statement

no

-

Subset

-

A collection of terms grouped for some purpose

-

no

+

Property

+

+

yes

Class

yes

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

HasMinimalMetadata

-

Absolute minimum metadata model

+

Agent

+

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HasMinimalMetadata

+

Absolute minimum metadata model

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/narrowMatch.html b/datamodels/ontology-metadata/narrowMatch.html index e947bfc03..321793a79 100644 --- a/datamodels/ontology-metadata/narrowMatch.html +++ b/datamodels/ontology-metadata/narrowMatch.html @@ -106,54 +106,54 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

-

no

- -

Property

-

-

yes

- -

HasMappings

-

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

AnnotationProperty

A property used in non-logical axioms

no

-

Agent

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

NamedIndividual

-

An instance that has a IRI

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

NamedIndividual

+

An instance that has a IRI

no

-

Subset

-

A collection of terms grouped for some purpose

+

Image

+

no

-

Class

+

Property

yes

-

Image

+

HasMappings

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

-

no

+

Class

+

+

yes

HomoSapiens

An individual human being

no

+

Agent

+

+

no

+ +

Subset

+

A collection of terms grouped for some purpose

+

no

+ diff --git a/datamodels/ontology-metadata/oneOf.html b/datamodels/ontology-metadata/oneOf.html index 1dd68be4e..05b42704b 100644 --- a/datamodels/ontology-metadata/oneOf.html +++ b/datamodels/ontology-metadata/oneOf.html @@ -106,7 +106,7 @@

Applicable Classes

ClassExpression

+

Class

no

@@ -114,7 +114,7 @@

Applicable Classes

Class

+

ClassExpression

no

diff --git a/datamodels/ontology-metadata/ontology_term_requester.html b/datamodels/ontology-metadata/ontology_term_requester.html index ddf44de46..3d7eaa1fe 100644 --- a/datamodels/ontology-metadata/ontology_term_requester.html +++ b/datamodels/ontology-metadata/ontology_term_requester.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/page.html b/datamodels/ontology-metadata/page.html index 9fb285242..4da2937f5 100644 --- a/datamodels/ontology-metadata/page.html +++ b/datamodels/ontology-metadata/page.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

HasUserInformation

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HasUserInformation

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/propertyChainAxiom.html b/datamodels/ontology-metadata/propertyChainAxiom.html index 2b33a79b1..ba5d8fc5c 100644 --- a/datamodels/ontology-metadata/propertyChainAxiom.html +++ b/datamodels/ontology-metadata/propertyChainAxiom.html @@ -106,12 +106,12 @@

Applicable Classes

ObjectProperty

-

A property that connects two objects in logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

diff --git a/datamodels/ontology-metadata/range.html b/datamodels/ontology-metadata/range.html index 4b4185acf..9e63fb5e1 100644 --- a/datamodels/ontology-metadata/range.html +++ b/datamodels/ontology-metadata/range.html @@ -110,20 +110,20 @@

Applicable Classes

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/seeAlso.html b/datamodels/ontology-metadata/seeAlso.html index a7881d943..1f2ed1a2e 100644 --- a/datamodels/ontology-metadata/seeAlso.html +++ b/datamodels/ontology-metadata/seeAlso.html @@ -97,56 +97,56 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Axiom

-

A logical or non-logical statement

+

Image

+

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Axiom

+

A logical or non-logical statement

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

HasUserInformation

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

HasUserInformation

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/shorthand.html b/datamodels/ontology-metadata/shorthand.html index 038de9518..30d28564c 100644 --- a/datamodels/ontology-metadata/shorthand.html +++ b/datamodels/ontology-metadata/shorthand.html @@ -97,18 +97,18 @@

Applicable Classes

AnnotationProperty

-

A property used in non-logical axioms

-

no

- -

Subset

+

Subset

A collection of terms grouped for some purpose

no

-

TransitiveProperty

+

TransitiveProperty

An ObjectProperty with the property of transitivity

no

+

AnnotationProperty

+

A property used in non-logical axioms

+

no

+

ObjectProperty

A property that connects two objects in logical axioms

no

diff --git a/datamodels/ontology-metadata/should_conform_to.html b/datamodels/ontology-metadata/should_conform_to.html index bdc79ea73..d709c0265 100644 --- a/datamodels/ontology-metadata/should_conform_to.html +++ b/datamodels/ontology-metadata/should_conform_to.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasLifeCycle

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Class

+

no

-

Class

-

+

HomoSapiens

+

An individual human being

no

-

Image

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

HasLifeCycle

+

no

diff --git a/datamodels/ontology-metadata/source.html b/datamodels/ontology-metadata/source.html index 42db927e5..494ff8aa3 100644 --- a/datamodels/ontology-metadata/source.html +++ b/datamodels/ontology-metadata/source.html @@ -106,12 +106,12 @@

Applicable Classes

Ontology

-

An OWL ontology

+

Axiom

+

A logical or non-logical statement

no

-

Axiom

-

A logical or non-logical statement

+

Ontology

+

An OWL ontology

no

diff --git a/datamodels/ontology-metadata/subClassOf.html b/datamodels/ontology-metadata/subClassOf.html index 6dfc1283a..048128a17 100644 --- a/datamodels/ontology-metadata/subClassOf.html +++ b/datamodels/ontology-metadata/subClassOf.html @@ -106,17 +106,17 @@

Applicable Classes

ClassExpression

+

Class

-

no

+

yes

Restriction

no

-

Class

+

ClassExpression

-

yes

+

no

diff --git a/datamodels/ontology-metadata/temporal_interpretation.html b/datamodels/ontology-metadata/temporal_interpretation.html index fd45293e4..ce57d273a 100644 --- a/datamodels/ontology-metadata/temporal_interpretation.html +++ b/datamodels/ontology-metadata/temporal_interpretation.html @@ -97,12 +97,12 @@

Applicable Classes

ObjectProperty

-

A property that connects two objects in logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

diff --git a/datamodels/ontology-metadata/term_editor.html b/datamodels/ontology-metadata/term_editor.html index 6cb472341..5fa95ab59 100644 --- a/datamodels/ontology-metadata/term_editor.html +++ b/datamodels/ontology-metadata/term_editor.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/term_replaced_by.html b/datamodels/ontology-metadata/term_replaced_by.html index b55dd4289..542c52536 100644 --- a/datamodels/ontology-metadata/term_replaced_by.html +++ b/datamodels/ontology-metadata/term_replaced_by.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasLifeCycle

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Property

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Class

+

no

-

Class

-

+

HomoSapiens

+

An individual human being

no

-

Image

+

Agent

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Subset

+

A collection of terms grouped for some purpose

no

-

HomoSapiens

-

An individual human being

+

HasLifeCycle

+

no

diff --git a/datamodels/ontology-metadata/term_tracker_item.html b/datamodels/ontology-metadata/term_tracker_item.html index c4ccabac2..be2e8ccfa 100644 --- a/datamodels/ontology-metadata/term_tracker_item.html +++ b/datamodels/ontology-metadata/term_tracker_item.html @@ -106,52 +106,52 @@

Applicable Classes

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

Property

-

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

HasProvenance

+

Image

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

HasProvenance

+

no

-

Subset

-

A collection of terms grouped for some purpose

+

Property

+

no

Class

no

-

Image

-

+

HomoSapiens

+

An individual human being

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

Agent

+

no

-

HomoSapiens

-

An individual human being

+

Subset

+

A collection of terms grouped for some purpose

no

diff --git a/datamodels/ontology-metadata/type.html b/datamodels/ontology-metadata/type.html index 99f912b66..e65b8f764 100644 --- a/datamodels/ontology-metadata/type.html +++ b/datamodels/ontology-metadata/type.html @@ -106,35 +106,35 @@

Applicable Classes

NamedObject

-

Anything with an IRI

+

Term

+

A NamedThing that includes classes, properties, but not ontologies

no

-

TransitiveProperty

-

An ObjectProperty with the property of transitivity

+

AnnotationProperty

+

A property used in non-logical axioms

no

-

Property

-

+

TransitiveProperty

+

An ObjectProperty with the property of transitivity

no

-

AnnotationProperty

-

A property used in non-logical axioms

+

Thing

+

no

-

Agent

-

+

ObjectProperty

+

A property that connects two objects in logical axioms

no

NamedIndividual

An instance that has a IRI

no

-

Term

-

A NamedThing that includes classes, properties, but not ontologies

+

Image

+

no

-

Thing

+

Property

no

@@ -142,24 +142,24 @@

Applicable Classes

Image

-

+

HomoSapiens

+

An individual human being

no

-

Ontology

-

An OWL ontology

+

Agent

+

no

Subset

A collection of terms grouped for some purpose

no

-

ObjectProperty

-

A property that connects two objects in logical axioms

+

NamedObject

+

Anything with an IRI

no

-

HomoSapiens

-

An individual human being

+

Ontology

+

An OWL ontology

no

diff --git a/datamodels/ontology-metadata/unionOf.html b/datamodels/ontology-metadata/unionOf.html index 09a40af84..8adb9cd96 100644 --- a/datamodels/ontology-metadata/unionOf.html +++ b/datamodels/ontology-metadata/unionOf.html @@ -106,7 +106,7 @@

Applicable Classes

ClassExpression

+

Class

no

@@ -114,7 +114,7 @@

Applicable Classes

Class

+

ClassExpression

no

diff --git a/datamodels/summary-statistics/id.html b/datamodels/summary-statistics/id.html index f615e6cf2..a9949b94c 100644 --- a/datamodels/summary-statistics/id.html +++ b/datamodels/summary-statistics/id.html @@ -97,12 +97,20 @@

Applicable Classes

SummaryStatisticsReport

+

GroupedStatistics

+

summary statistics for the entire resource

+

no

+ +

SummaryStatisticsReport

abstract base class for all summary statistics reports

no

-

GroupedStatistics

-

summary statistics for the entire resource

+

ContributorRole

+

A role that a contributor can have

+

no

+ +

UngroupedStatistics

+

A summary statistics report object

no

Agent

@@ -113,14 +121,6 @@

Applicable Classes

UngroupedStatistics

-

A summary statistics report object

-

no

- -

ContributorRole

-

A role that a contributor can have

-

no

- diff --git a/datamodels/taxon-constraints/id.html b/datamodels/taxon-constraints/id.html index 03bca944f..fcc1fe351 100644 --- a/datamodels/taxon-constraints/id.html +++ b/datamodels/taxon-constraints/id.html @@ -98,20 +98,20 @@

Applicable Classes

Term

-

An ontology term

+

PredicateTerm

+

A term that represents a relationship type

no

-

SubjectTerm

-

A term that is the subject of a taxon constraint

+

Taxon

+

A term that represents a taxonomic group, may be at species level of a higher…

no

-

Taxon

-

A term that represents a taxonomic group, may be at species level of a higher…

+

SubjectTerm

+

A term that is the subject of a taxon constraint

no

-

PredicateTerm

-

A term that represents a relationship type

+

Term

+

An ontology term

no

diff --git a/datamodels/taxon-constraints/label.html b/datamodels/taxon-constraints/label.html index 5037b6ef0..e6ea558a7 100644 --- a/datamodels/taxon-constraints/label.html +++ b/datamodels/taxon-constraints/label.html @@ -98,20 +98,20 @@

Applicable Classes

Term

-

An ontology term

+

PredicateTerm

+

A term that represents a relationship type

no

-

SubjectTerm

-

A term that is the subject of a taxon constraint

+

Taxon

+

A term that represents a taxonomic group, may be at species level of a higher…

no

-

Taxon

-

A term that represents a taxonomic group, may be at species level of a higher…

+

SubjectTerm

+

A term that is the subject of a taxon constraint

no

-

PredicateTerm

-

A term that represents a relationship type

+

Term

+

An ontology term

no

diff --git a/datamodels/text-annotator/subject_end.html b/datamodels/text-annotator/subject_end.html index a19859bf1..005df5635 100644 --- a/datamodels/text-annotator/subject_end.html +++ b/datamodels/text-annotator/subject_end.html @@ -97,12 +97,12 @@

Applicable Classes

HasSpan

-

+

TextAnnotation

+

An individual text annotation

no

-

TextAnnotation

-

An individual text annotation

+

HasSpan

+

no

diff --git a/datamodels/text-annotator/subject_label.html b/datamodels/text-annotator/subject_label.html index 243d5b20e..f3002cda2 100644 --- a/datamodels/text-annotator/subject_label.html +++ b/datamodels/text-annotator/subject_label.html @@ -98,12 +98,12 @@

Applicable Classes

HasSpan

-

+

TextAnnotation

+

An individual text annotation

no

-

TextAnnotation

-

An individual text annotation

+

HasSpan

+

no

diff --git a/datamodels/text-annotator/subject_source.html b/datamodels/text-annotator/subject_source.html index 48ea4c71b..1982ef524 100644 --- a/datamodels/text-annotator/subject_source.html +++ b/datamodels/text-annotator/subject_source.html @@ -97,12 +97,12 @@

Applicable Classes

HasSpan

-

+

TextAnnotation

+

An individual text annotation

no

-

TextAnnotation

-

An individual text annotation

+

HasSpan

+

no

diff --git a/datamodels/text-annotator/subject_start.html b/datamodels/text-annotator/subject_start.html index 46e0a52f6..e0645e88d 100644 --- a/datamodels/text-annotator/subject_start.html +++ b/datamodels/text-annotator/subject_start.html @@ -97,12 +97,12 @@

Applicable Classes

HasSpan

-

+

TextAnnotation

+

An individual text annotation

no

-

TextAnnotation

-

An individual text annotation

+

HasSpan

+

no

diff --git a/datamodels/text-annotator/subject_text_id.html b/datamodels/text-annotator/subject_text_id.html index 5b1e077ae..2f55fb2f9 100644 --- a/datamodels/text-annotator/subject_text_id.html +++ b/datamodels/text-annotator/subject_text_id.html @@ -97,12 +97,12 @@

Applicable Classes

HasSpan

-

+

TextAnnotation

+

An individual text annotation

no

-

TextAnnotation

-

An individual text annotation

+

HasSpan

+

no

diff --git a/datamodels/validation/id.html b/datamodels/validation/id.html index 1d0af10a4..9e4b2ac19 100644 --- a/datamodels/validation/id.html +++ b/datamodels/validation/id.html @@ -101,11 +101,11 @@

Applicable Classes

NamedResource

+

ConstraintComponent

no

-

ConstraintComponent

+

NamedResource

no

diff --git a/datamodels/validation/info.html b/datamodels/validation/info.html index 652f2c513..4ddb2364f 100644 --- a/datamodels/validation/info.html +++ b/datamodels/validation/info.html @@ -102,20 +102,20 @@

Applicable Classes

MappingValidationResult

-

A validation result where the check is to determine if a mapping is correct

+

ValidationResult

+

An individual result arising from validation of a data instance using a parti…

no

-

ExternalReferenceValidationResult

-

A validation result where the check is to determine if a link to an external …

+

MappingValidationResult

+

A validation result where the check is to determine if a mapping is correct

no

RepairOperation

The result of performing an individual repair

no

-

ValidationResult

-

An individual result arising from validation of a data instance using a parti…

+

ExternalReferenceValidationResult

+

A validation result where the check is to determine if a link to an external …

no

diff --git a/datamodels/validation/instantiates.html b/datamodels/validation/instantiates.html index 472d81679..c87e96616 100644 --- a/datamodels/validation/instantiates.html +++ b/datamodels/validation/instantiates.html @@ -98,16 +98,16 @@

Applicable Classes

ExternalReferenceValidationResult

-

A validation result where the check is to determine if a link to an external …

+

ValidationResult

+

An individual result arising from validation of a data instance using a parti…

no

DefinitionValidationResult

no

-

ValidationResult

-

An individual result arising from validation of a data instance using a parti…

+

ExternalReferenceValidationResult

+

A validation result where the check is to determine if a link to an external …

no

diff --git a/datamodels/validation/object.html b/datamodels/validation/object.html index 422fb226c..9b1816435 100644 --- a/datamodels/validation/object.html +++ b/datamodels/validation/object.html @@ -97,16 +97,16 @@

Applicable Classes

ExternalReferenceValidationResult

-

A validation result where the check is to determine if a link to an external …

+

ValidationResult

+

An individual result arising from validation of a data instance using a parti…

no

DefinitionValidationResult

no

-

ValidationResult

-

An individual result arising from validation of a data instance using a parti…

+

ExternalReferenceValidationResult

+

A validation result where the check is to determine if a link to an external …

no

diff --git a/datamodels/validation/object_str.html b/datamodels/validation/object_str.html index 7115be39e..c578a1b62 100644 --- a/datamodels/validation/object_str.html +++ b/datamodels/validation/object_str.html @@ -97,16 +97,16 @@

Applicable Classes

ExternalReferenceValidationResult

-

A validation result where the check is to determine if a link to an external …

+

ValidationResult

+

An individual result arising from validation of a data instance using a parti…

no

DefinitionValidationResult

no

-

ValidationResult

-

An individual result arising from validation of a data instance using a parti…

+

ExternalReferenceValidationResult

+

A validation result where the check is to determine if a link to an external …

no

diff --git a/datamodels/validation/predicate.html b/datamodels/validation/predicate.html index 819c89ce4..9e8a5b9ca 100644 --- a/datamodels/validation/predicate.html +++ b/datamodels/validation/predicate.html @@ -98,16 +98,16 @@

Applicable Classes

ExternalReferenceValidationResult

-

A validation result where the check is to determine if a link to an external …

+

ValidationResult

+

An individual result arising from validation of a data instance using a parti…

no

DefinitionValidationResult

no

-

ValidationResult

-

An individual result arising from validation of a data instance using a parti…

+

ExternalReferenceValidationResult

+

A validation result where the check is to determine if a link to an external …

no

diff --git a/datamodels/validation/results.html b/datamodels/validation/results.html index 020f8901b..1f635cc54 100644 --- a/datamodels/validation/results.html +++ b/datamodels/validation/results.html @@ -98,16 +98,16 @@

Applicable Classes

ValidationReport

-

A report that consists of validation results

+

RepairReport

+

A report that consists of repair operation results

yes

Report

A report object that is a holder to multiple report results

no

-

RepairReport

-

A report that consists of repair operation results

+

ValidationReport

+

A report that consists of validation results

yes

diff --git a/datamodels/validation/severity.html b/datamodels/validation/severity.html index e45e94d4d..8a0519cfb 100644 --- a/datamodels/validation/severity.html +++ b/datamodels/validation/severity.html @@ -98,20 +98,20 @@

Applicable Classes

ExternalReferenceValidationResult

-

A validation result where the check is to determine if a link to an external …

+

DefinitionValidationResult

+

no

-

DefinitionValidationResult

-

+

ValidationResult

+

An individual result arising from validation of a data instance using a parti…

no

TypeSeverityKeyValue

key-value pair that maps a validation result type to a severity setting, for …

no

-

ValidationResult

-

An individual result arising from validation of a data instance using a parti…

+

ExternalReferenceValidationResult

+

A validation result where the check is to determine if a link to an external …

no

diff --git a/datamodels/validation/source.html b/datamodels/validation/source.html index 4b1358c7c..0a0d4a032 100644 --- a/datamodels/validation/source.html +++ b/datamodels/validation/source.html @@ -97,16 +97,16 @@

Applicable Classes

ExternalReferenceValidationResult

-

A validation result where the check is to determine if a link to an external …

+

ValidationResult

+

An individual result arising from validation of a data instance using a parti…

no

DefinitionValidationResult

no

-

ValidationResult

-

An individual result arising from validation of a data instance using a parti…

+

ExternalReferenceValidationResult

+

A validation result where the check is to determine if a link to an external …

no

diff --git a/datamodels/validation/subject.html b/datamodels/validation/subject.html index f12da67f3..0e89dcd1d 100644 --- a/datamodels/validation/subject.html +++ b/datamodels/validation/subject.html @@ -98,16 +98,16 @@

Applicable Classes

ExternalReferenceValidationResult

-

A validation result where the check is to determine if a link to an external …

+

ValidationResult

+

An individual result arising from validation of a data instance using a parti…

no

DefinitionValidationResult

no

-

ValidationResult

-

An individual result arising from validation of a data instance using a parti…

+

ExternalReferenceValidationResult

+

A validation result where the check is to determine if a link to an external …

no

diff --git a/datamodels/validation/type.html b/datamodels/validation/type.html index e7009bc02..ebbee6d4d 100644 --- a/datamodels/validation/type.html +++ b/datamodels/validation/type.html @@ -98,20 +98,20 @@

Applicable Classes

ExternalReferenceValidationResult

-

A validation result where the check is to determine if a link to an external …

+

DefinitionValidationResult

+

no

-

DefinitionValidationResult

-

+

ValidationResult

+

An individual result arising from validation of a data instance using a parti…

no

TypeSeverityKeyValue

key-value pair that maps a validation result type to a severity setting, for …

no

-

ValidationResult

-

An individual result arising from validation of a data instance using a parti…

+

ExternalReferenceValidationResult

+

A validation result where the check is to determine if a link to an external …

no

diff --git a/mapping-rules/rules.md b/mapping-rules/rules.md index dc695747f..1b068045d 100644 --- a/mapping-rules/rules.md +++ b/mapping-rules/rules.md @@ -16,8 +16,8 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules) | Name | Description | Modifies Slot | | --- | --- | --- | -| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no | | [MappingRuleCollection](MappingRuleCollection.md) | A collection of mapping rules | no | +| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no | diff --git a/obograph/id.md b/obograph/id.md index 76ef7e43c..060cecc5e 100644 --- a/obograph/id.md +++ b/obograph/id.md @@ -21,10 +21,10 @@ URI: [obographs:id](https://github.com/geneontology/obographs/id) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | -| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | | [SubsetDefinition](SubsetDefinition.md) | | no | +| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | | [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no | +| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | diff --git a/obograph/lang.md b/obograph/lang.md index 134e96d99..2dac23bff 100644 --- a/obograph/lang.md +++ b/obograph/lang.md @@ -21,11 +21,11 @@ URI: [obographs:lang](https://github.com/geneontology/obographs/lang) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | diff --git a/obograph/lbl.md b/obograph/lbl.md index b6c6d5c1a..2d3091d66 100644 --- a/obograph/lbl.md +++ b/obograph/lbl.md @@ -21,10 +21,10 @@ URI: [rdfs:label](http://www.w3.org/2000/01/rdf-schema#label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | -| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | | [SubsetDefinition](SubsetDefinition.md) | | no | +| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | | [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no | +| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | diff --git a/obograph/meta.md b/obograph/meta.md index dd5dd6342..6034f8984 100644 --- a/obograph/meta.md +++ b/obograph/meta.md @@ -21,20 +21,20 @@ URI: [obographs:meta](https://github.com/geneontology/obographs/meta) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | -| [LogicalDefinitionAxiom](LogicalDefinitionAxiom.md) | An axiom that defines a class in terms of a genus or set of genus classes and... | no | -| [PropertyChainAxiom](PropertyChainAxiom.md) | An axiom that represents an OWL property chain, e | no | -| [GraphDocument](GraphDocument.md) | A graph document is a collection of graphs together with a set of prefixes th... | no | +| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no | -| [EquivalentNodesSet](EquivalentNodesSet.md) | A clique of nodes that are all mutually equivalent | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no | -| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no | -| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | | [Node](Node.md) | A node is a class, property, or other entity in an ontology | no | -| [Axiom](Axiom.md) | A generic grouping for any OWL axiom or group of axioms that is not captured ... | no | +| [EquivalentNodesSet](EquivalentNodesSet.md) | A clique of nodes that are all mutually equivalent | no | | [Edge](Edge.md) | An edge is a simple typed relationship between two nodes | no | | [DisjointClassExpressionsAxiom](DisjointClassExpressionsAxiom.md) | An axiom that defines a set of classes or class expressions as being mutually... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | +| [Axiom](Axiom.md) | A generic grouping for any OWL axiom or group of axioms that is not captured ... | no | +| [LogicalDefinitionAxiom](LogicalDefinitionAxiom.md) | An axiom that defines a class in terms of a genus or set of genus classes and... | no | +| [PropertyChainAxiom](PropertyChainAxiom.md) | An axiom that represents an OWL property chain, e | no | +| [GraphDocument](GraphDocument.md) | A graph document is a collection of graphs together with a set of prefixes th... | no | +| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | | [DomainRangeAxiom](DomainRangeAxiom.md) | This groups potentially multiple axioms that constrain the usage of a propert... | no | diff --git a/obograph/pred.md b/obograph/pred.md index 808182811..e73fbb1ab 100644 --- a/obograph/pred.md +++ b/obograph/pred.md @@ -21,13 +21,13 @@ URI: [rdf:predicate](http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | yes | -| [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no | -| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [Edge](Edge.md) | An edge is a simple typed relationship between two nodes | no | | [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | +| [Edge](Edge.md) | An edge is a simple typed relationship between two nodes | no | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | +| [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no | +| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | diff --git a/obograph/val.md b/obograph/val.md index abbd8de5f..243a270d5 100644 --- a/obograph/val.md +++ b/obograph/val.md @@ -21,11 +21,11 @@ URI: [rdf:object](http://www.w3.org/1999/02/22-rdf-syntax-ns#object) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | yes | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | yes | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | yes | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | yes | diff --git a/obograph/valType.md b/obograph/valType.md index 4462f2186..37a48fb88 100644 --- a/obograph/valType.md +++ b/obograph/valType.md @@ -21,11 +21,11 @@ URI: [obographs:valType](https://github.com/geneontology/obographs/valType) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | diff --git a/obograph/xrefs.md b/obograph/xrefs.md index 8e7772ef3..661659eb0 100644 --- a/obograph/xrefs.md +++ b/obograph/xrefs.md @@ -21,12 +21,12 @@ URI: [obographs:xrefs](https://github.com/geneontology/obographs/xrefs) | Name | Description | Modifies Slot | | --- | --- | --- | -| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | -| [Meta](Meta.md) | A collection of annotations on an entity or ontology or edge or axiom | yes | | [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no | +| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | | [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | yes | +| [Meta](Meta.md) | A collection of annotations on an entity or ontology or edge or axiom | yes | +| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no | | [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no | -| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no | diff --git a/ontology-metadata/IEDB_alternative_term.md b/ontology-metadata/IEDB_alternative_term.md index 7e3da62d1..04562dcb1 100644 --- a/ontology-metadata/IEDB_alternative_term.md +++ b/ontology-metadata/IEDB_alternative_term.md @@ -21,18 +21,18 @@ URI: [OBI:9991118](http://purl.obolibrary.org/obo/OBI_9991118) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/ISA_alternative_term.md b/ontology-metadata/ISA_alternative_term.md index 9d6742db1..e5ea6298b 100644 --- a/ontology-metadata/ISA_alternative_term.md +++ b/ontology-metadata/ISA_alternative_term.md @@ -21,18 +21,18 @@ URI: [OBI:0001847](http://purl.obolibrary.org/obo/OBI_0001847) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/OBO_foundry_unique_label.md b/ontology-metadata/OBO_foundry_unique_label.md index 6ca150297..c9e2c71b6 100644 --- a/ontology-metadata/OBO_foundry_unique_label.md +++ b/ontology-metadata/OBO_foundry_unique_label.md @@ -21,18 +21,18 @@ URI: [IAO:0000589](http://purl.obolibrary.org/obo/IAO_0000589) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/alternative_term.md b/ontology-metadata/alternative_term.md index 5ab7cabda..b2d6124f8 100644 --- a/ontology-metadata/alternative_term.md +++ b/ontology-metadata/alternative_term.md @@ -25,18 +25,18 @@ URI: [IAO:0000118](http://purl.obolibrary.org/obo/IAO_0000118) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/broadMatch.md b/ontology-metadata/broadMatch.md index ef8aa0759..e4d85c744 100644 --- a/ontology-metadata/broadMatch.md +++ b/ontology-metadata/broadMatch.md @@ -21,18 +21,18 @@ URI: [skos:broadMatch](http://www.w3.org/2004/02/skos/core#broadMatch) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | yes | | [HasMappings](HasMappings.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/cardinality.md b/ontology-metadata/cardinality.md index 95d91a393..bd17dac5a 100644 --- a/ontology-metadata/cardinality.md +++ b/ontology-metadata/cardinality.md @@ -21,9 +21,9 @@ URI: [owl:cardinality](http://www.w3.org/2002/07/owl#cardinality) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/ontology-metadata/category.md b/ontology-metadata/category.md index 1ac32c2c5..57113178f 100644 --- a/ontology-metadata/category.md +++ b/ontology-metadata/category.md @@ -21,18 +21,18 @@ URI: [biolink:category](https://w3id.org/biolink/vocab/category) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HasCategory](HasCategory.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/closeMatch.md b/ontology-metadata/closeMatch.md index 0c42d6ab3..2fd178de4 100644 --- a/ontology-metadata/closeMatch.md +++ b/ontology-metadata/closeMatch.md @@ -21,18 +21,18 @@ URI: [skos:closeMatch](http://www.w3.org/2004/02/skos/core#closeMatch) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | yes | | [HasMappings](HasMappings.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/comment.md b/ontology-metadata/comment.md index 9c04ba804..b5fbdb2ba 100644 --- a/ontology-metadata/comment.md +++ b/ontology-metadata/comment.md @@ -21,20 +21,20 @@ URI: [rdfs:comment](http://www.w3.org/2000/01/rdf-schema#comment) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [Ontology](Ontology.md) | An OWL ontology | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/ontology-metadata/complementOf.md b/ontology-metadata/complementOf.md index 82e481e34..e5e753913 100644 --- a/ontology-metadata/complementOf.md +++ b/ontology-metadata/complementOf.md @@ -21,9 +21,9 @@ URI: [owl:complementOf](http://www.w3.org/2002/07/owl#complementOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/ontology-metadata/conformsTo.md b/ontology-metadata/conformsTo.md index 03c858cd2..1cc1ad959 100644 --- a/ontology-metadata/conformsTo.md +++ b/ontology-metadata/conformsTo.md @@ -21,18 +21,18 @@ URI: [dcterms:conformsTo](http://purl.org/dc/terms/conformsTo) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HasCategory](HasCategory.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/consider.md b/ontology-metadata/consider.md index 0f9ccab7e..e840b9994 100644 --- a/ontology-metadata/consider.md +++ b/ontology-metadata/consider.md @@ -21,18 +21,18 @@ URI: [oio:consider](http://www.geneontology.org/formats/oboInOwl#consider) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/ontology-metadata/contributor.md b/ontology-metadata/contributor.md index 16abfae49..7dffcbd70 100644 --- a/ontology-metadata/contributor.md +++ b/ontology-metadata/contributor.md @@ -21,18 +21,18 @@ URI: [dcterms:contributor](http://purl.org/dc/terms/contributor) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/created.md b/ontology-metadata/created.md index ece805c44..0e16e6c7d 100644 --- a/ontology-metadata/created.md +++ b/ontology-metadata/created.md @@ -26,19 +26,19 @@ URI: [dcterms:created](http://purl.org/dc/terms/created) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [Ontology](Ontology.md) | An OWL ontology | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/ontology-metadata/created_by.md b/ontology-metadata/created_by.md index 5e9010dbd..28c1d9c08 100644 --- a/ontology-metadata/created_by.md +++ b/ontology-metadata/created_by.md @@ -21,19 +21,19 @@ URI: [oio:created_by](http://www.geneontology.org/formats/oboInOwl#created_by) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasProvenance](HasProvenance.md) | | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasProvenance](HasProvenance.md) | | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/creation_date.md b/ontology-metadata/creation_date.md index 29c7b50fc..9ca6a8096 100644 --- a/ontology-metadata/creation_date.md +++ b/ontology-metadata/creation_date.md @@ -21,18 +21,18 @@ URI: [oio:creation_date](http://www.geneontology.org/formats/oboInOwl#creation_d | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/creator.md b/ontology-metadata/creator.md index 9f921cb1a..6151d6a7f 100644 --- a/ontology-metadata/creator.md +++ b/ontology-metadata/creator.md @@ -21,19 +21,19 @@ URI: [dcterms:creator](http://purl.org/dc/terms/creator) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [Ontology](Ontology.md) | An OWL ontology | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/ontology-metadata/curator_note.md b/ontology-metadata/curator_note.md index 339e6ea56..6d9c59d62 100644 --- a/ontology-metadata/curator_note.md +++ b/ontology-metadata/curator_note.md @@ -21,18 +21,18 @@ URI: [IAO:0000232](http://purl.obolibrary.org/obo/IAO_0000232) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/database_cross_reference.md b/ontology-metadata/database_cross_reference.md index e033aa969..cab9b5341 100644 --- a/ontology-metadata/database_cross_reference.md +++ b/ontology-metadata/database_cross_reference.md @@ -21,19 +21,19 @@ URI: [oio:hasDbXref](http://www.geneontology.org/formats/oboInOwl#hasDbXref) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | -| [HasMappings](HasMappings.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | yes | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | +| [HasMappings](HasMappings.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/date.md b/ontology-metadata/date.md index d62a008ee..b99d131da 100644 --- a/ontology-metadata/date.md +++ b/ontology-metadata/date.md @@ -26,18 +26,18 @@ URI: [dcterms:date](http://purl.org/dc/terms/date) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/definition.md b/ontology-metadata/definition.md index cda00c955..8e356596c 100644 --- a/ontology-metadata/definition.md +++ b/ontology-metadata/definition.md @@ -21,18 +21,18 @@ URI: [IAO:0000115](http://purl.obolibrary.org/obo/IAO_0000115) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | yes | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | yes | | [Image](Image.md) | | no | -| [HasMinimalMetadata](HasMinimalMetadata.md) | Absolute minimum metadata model | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | yes | +| [Class](Class.md) | | yes | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasMinimalMetadata](HasMinimalMetadata.md) | Absolute minimum metadata model | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/definition_source.md b/ontology-metadata/definition_source.md index 55d8258d7..818528a8e 100644 --- a/ontology-metadata/definition_source.md +++ b/ontology-metadata/definition_source.md @@ -21,18 +21,18 @@ URI: [IAO:0000119](http://purl.obolibrary.org/obo/IAO_0000119) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/depicted_by.md b/ontology-metadata/depicted_by.md index 004cfec45..47343b0f2 100644 --- a/ontology-metadata/depicted_by.md +++ b/ontology-metadata/depicted_by.md @@ -21,18 +21,18 @@ URI: [foaf:depicted_by](http://xmlns.com/foaf/0.1/depicted_by) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/deprecated.md b/ontology-metadata/deprecated.md index 663eebdff..de3429dba 100644 --- a/ontology-metadata/deprecated.md +++ b/ontology-metadata/deprecated.md @@ -21,18 +21,18 @@ URI: [owl:deprecated](http://www.w3.org/2002/07/owl#deprecated) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/ontology-metadata/disjointWith.md b/ontology-metadata/disjointWith.md index c9ea1aee2..3f91a2dbe 100644 --- a/ontology-metadata/disjointWith.md +++ b/ontology-metadata/disjointWith.md @@ -21,12 +21,12 @@ URI: [owl:disjointWith](http://www.w3.org/2002/07/owl#disjointWith) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | | [PropertyExpression](PropertyExpression.md) | | no | -| [ClassExpression](ClassExpression.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/ontology-metadata/domain.md b/ontology-metadata/domain.md index a937e2a5f..59d664d22 100644 --- a/ontology-metadata/domain.md +++ b/ontology-metadata/domain.md @@ -22,10 +22,10 @@ URI: [rdfs:domain](http://www.w3.org/2000/01/rdf-schema#domain) | Name | Description | Modifies Slot | | --- | --- | --- | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/editor_note.md b/ontology-metadata/editor_note.md index 2f3a7f0d6..d370c6736 100644 --- a/ontology-metadata/editor_note.md +++ b/ontology-metadata/editor_note.md @@ -21,18 +21,18 @@ URI: [IAO:0000116](http://purl.obolibrary.org/obo/IAO_0000116) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/editor_preferred_term.md b/ontology-metadata/editor_preferred_term.md index 2820a3dd4..ab52d4f17 100644 --- a/ontology-metadata/editor_preferred_term.md +++ b/ontology-metadata/editor_preferred_term.md @@ -21,18 +21,18 @@ URI: [IAO:0000111](http://purl.obolibrary.org/obo/IAO_0000111) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/equivalentClass.md b/ontology-metadata/equivalentClass.md index a5c0b60d4..57b8ddfe9 100644 --- a/ontology-metadata/equivalentClass.md +++ b/ontology-metadata/equivalentClass.md @@ -21,9 +21,9 @@ URI: [owl:equivalentClass](http://www.w3.org/2002/07/owl#equivalentClass) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/ontology-metadata/equivalentProperty.md b/ontology-metadata/equivalentProperty.md index 428266a71..d51f69cbb 100644 --- a/ontology-metadata/equivalentProperty.md +++ b/ontology-metadata/equivalentProperty.md @@ -21,8 +21,8 @@ URI: [owl:equivalentProperty](http://www.w3.org/2002/07/owl#equivalentProperty) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/ontology-metadata/exactMatch.md b/ontology-metadata/exactMatch.md index 75429d24c..a08416cea 100644 --- a/ontology-metadata/exactMatch.md +++ b/ontology-metadata/exactMatch.md @@ -21,18 +21,18 @@ URI: [skos:exactMatch](http://www.w3.org/2004/02/skos/core#exactMatch) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | yes | | [HasMappings](HasMappings.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/example_of_usage.md b/ontology-metadata/example_of_usage.md index 5ca0003eb..eb13e6902 100644 --- a/ontology-metadata/example_of_usage.md +++ b/ontology-metadata/example_of_usage.md @@ -21,18 +21,18 @@ URI: [IAO:0000112](http://purl.obolibrary.org/obo/IAO_0000112) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/excluded_from_QC_check.md b/ontology-metadata/excluded_from_QC_check.md index ea65adff8..f6f5f1b81 100644 --- a/ontology-metadata/excluded_from_QC_check.md +++ b/ontology-metadata/excluded_from_QC_check.md @@ -21,18 +21,18 @@ URI: [omoschema:excluded_from_QC_check](https://w3id.org/oak/ontology-metadata/e | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/ontology-metadata/excluded_subClassOf.md b/ontology-metadata/excluded_subClassOf.md index 883b6604b..ebe53d641 100644 --- a/ontology-metadata/excluded_subClassOf.md +++ b/ontology-metadata/excluded_subClassOf.md @@ -21,18 +21,18 @@ URI: [omoschema:excluded_subClassOf](https://w3id.org/oak/ontology-metadata/excl | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/ontology-metadata/excluded_synonym.md b/ontology-metadata/excluded_synonym.md index e64e5cbcc..ccb9e5e46 100644 --- a/ontology-metadata/excluded_synonym.md +++ b/ontology-metadata/excluded_synonym.md @@ -21,18 +21,18 @@ URI: [omoschema:excluded_synonym](https://w3id.org/oak/ontology-metadata/exclude | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/ontology-metadata/has_alternative_id.md b/ontology-metadata/has_alternative_id.md index a1d3cbad8..e7b652a3b 100644 --- a/ontology-metadata/has_alternative_id.md +++ b/ontology-metadata/has_alternative_id.md @@ -26,18 +26,18 @@ URI: [oio:hasAlternativeId](http://www.geneontology.org/formats/oboInOwl#hasAlte | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/ontology-metadata/has_broad_synonym.md b/ontology-metadata/has_broad_synonym.md index 2cc0e6c76..71922d34d 100644 --- a/ontology-metadata/has_broad_synonym.md +++ b/ontology-metadata/has_broad_synonym.md @@ -22,18 +22,18 @@ URI: [oio:hasBroadSynonym](http://www.geneontology.org/formats/oboInOwl#hasBroad | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/has_curation_status.md b/ontology-metadata/has_curation_status.md index c254a613f..1a987226b 100644 --- a/ontology-metadata/has_curation_status.md +++ b/ontology-metadata/has_curation_status.md @@ -21,18 +21,18 @@ URI: [IAO:0000114](http://purl.obolibrary.org/obo/IAO_0000114) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/has_exact_synonym.md b/ontology-metadata/has_exact_synonym.md index 2bff7b21b..f0492fc60 100644 --- a/ontology-metadata/has_exact_synonym.md +++ b/ontology-metadata/has_exact_synonym.md @@ -22,19 +22,19 @@ URI: [oio:hasExactSynonym](http://www.geneontology.org/formats/oboInOwl#hasExact | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | -| [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | +| [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/has_narrow_synonym.md b/ontology-metadata/has_narrow_synonym.md index bb5143c28..c0b50dbc7 100644 --- a/ontology-metadata/has_narrow_synonym.md +++ b/ontology-metadata/has_narrow_synonym.md @@ -22,18 +22,18 @@ URI: [oio:hasNarrowSynonym](http://www.geneontology.org/formats/oboInOwl#hasNarr | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/has_obo_namespace.md b/ontology-metadata/has_obo_namespace.md index 1463670ef..108dd2775 100644 --- a/ontology-metadata/has_obo_namespace.md +++ b/ontology-metadata/has_obo_namespace.md @@ -16,18 +16,18 @@ URI: [oio:hasOBONamespace](http://www.geneontology.org/formats/oboInOwl#hasOBONa | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HasCategory](HasCategory.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/has_obsolescence_reason.md b/ontology-metadata/has_obsolescence_reason.md index 365618de2..52d8333a7 100644 --- a/ontology-metadata/has_obsolescence_reason.md +++ b/ontology-metadata/has_obsolescence_reason.md @@ -21,18 +21,18 @@ URI: [IAO:0000231](http://purl.obolibrary.org/obo/IAO_0000231) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/ontology-metadata/has_related_synonym.md b/ontology-metadata/has_related_synonym.md index a1ca98121..12b7b1152 100644 --- a/ontology-metadata/has_related_synonym.md +++ b/ontology-metadata/has_related_synonym.md @@ -16,18 +16,18 @@ URI: [oio:hasRelatedSynonym](http://www.geneontology.org/formats/oboInOwl#hasRel | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | | [HasSynonyms](HasSynonyms.md) | a mixin for a class whose members can have synonyms | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/id.md b/ontology-metadata/id.md index d9f6d6738..5f5854a4d 100644 --- a/ontology-metadata/id.md +++ b/ontology-metadata/id.md @@ -26,19 +26,19 @@ URI: [omoschema:id](https://w3id.org/oak/ontology-metadata/id) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NamedObject](NamedObject.md) | Anything with an IRI | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | +| [Class](Class.md) | | no | +| [HomoSapiens](HomoSapiens.md) | An individual human being | yes | | [Agent](Agent.md) | | yes | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | -| [Image](Image.md) | | no | +| [NamedObject](NamedObject.md) | Anything with an IRI | no | | [Ontology](Ontology.md) | An OWL ontology | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | -| [HomoSapiens](HomoSapiens.md) | An individual human being | yes | diff --git a/ontology-metadata/image.md b/ontology-metadata/image.md index 86f468bad..c4a6c1f8d 100644 --- a/ontology-metadata/image.md +++ b/ontology-metadata/image.md @@ -21,18 +21,18 @@ URI: [sdo:image](http://schema.org/image) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/imported_from.md b/ontology-metadata/imported_from.md index defeab245..1051abb51 100644 --- a/ontology-metadata/imported_from.md +++ b/ontology-metadata/imported_from.md @@ -21,18 +21,18 @@ URI: [IAO:0000412](http://purl.obolibrary.org/obo/IAO_0000412) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/in_subset.md b/ontology-metadata/in_subset.md index 630a77304..ae0391ea7 100644 --- a/ontology-metadata/in_subset.md +++ b/ontology-metadata/in_subset.md @@ -21,18 +21,18 @@ URI: [oio:inSubset](http://www.geneontology.org/formats/oboInOwl#inSubset) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HasCategory](HasCategory.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/intersectionOf.md b/ontology-metadata/intersectionOf.md index cee3d6d8d..5ba0f0717 100644 --- a/ontology-metadata/intersectionOf.md +++ b/ontology-metadata/intersectionOf.md @@ -21,9 +21,9 @@ URI: [owl:intersectionOf](http://www.w3.org/2002/07/owl#intersectionOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/ontology-metadata/inverseOf.md b/ontology-metadata/inverseOf.md index 6833d1948..ad9589ed8 100644 --- a/ontology-metadata/inverseOf.md +++ b/ontology-metadata/inverseOf.md @@ -21,8 +21,8 @@ URI: [owl:inverseOf](http://www.w3.org/2002/07/owl#inverseOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/ontology-metadata/isDefinedBy.md b/ontology-metadata/isDefinedBy.md index d8b0d0119..3fa47857a 100644 --- a/ontology-metadata/isDefinedBy.md +++ b/ontology-metadata/isDefinedBy.md @@ -16,18 +16,18 @@ URI: [rdfs:isDefinedBy](http://www.w3.org/2000/01/rdf-schema#isDefinedBy) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/is_class_level.md b/ontology-metadata/is_class_level.md index 272500536..8fbb70f3b 100644 --- a/ontology-metadata/is_class_level.md +++ b/ontology-metadata/is_class_level.md @@ -17,10 +17,10 @@ URI: [oio:is_class_level](http://www.geneontology.org/formats/oboInOwl#is_class_ | Name | Description | Modifies Slot | | --- | --- | --- | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/is_cyclic.md b/ontology-metadata/is_cyclic.md index 4d57821a6..d43d66908 100644 --- a/ontology-metadata/is_cyclic.md +++ b/ontology-metadata/is_cyclic.md @@ -16,8 +16,8 @@ URI: [oio:is_cyclic](http://www.geneontology.org/formats/oboInOwl#is_cyclic) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/ontology-metadata/is_metadata_tag.md b/ontology-metadata/is_metadata_tag.md index 7261f28ba..685610b6b 100644 --- a/ontology-metadata/is_metadata_tag.md +++ b/ontology-metadata/is_metadata_tag.md @@ -17,10 +17,10 @@ URI: [oio:is_metadata_tag](http://www.geneontology.org/formats/oboInOwl#is_metad | Name | Description | Modifies Slot | | --- | --- | --- | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/is_transitive.md b/ontology-metadata/is_transitive.md index f3797d642..f74e25ce0 100644 --- a/ontology-metadata/is_transitive.md +++ b/ontology-metadata/is_transitive.md @@ -16,8 +16,8 @@ URI: [oio:is_transitive](http://www.geneontology.org/formats/oboInOwl#is_transit | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/ontology-metadata/label.md b/ontology-metadata/label.md index 3b9c100d3..c33292d35 100644 --- a/ontology-metadata/label.md +++ b/ontology-metadata/label.md @@ -21,19 +21,19 @@ URI: [rdfs:label](http://www.w3.org/2000/01/rdf-schema#label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | yes | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | yes | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [HasMinimalMetadata](HasMinimalMetadata.md) | Absolute minimum metadata model | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasMinimalMetadata](HasMinimalMetadata.md) | Absolute minimum metadata model | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/narrowMatch.md b/ontology-metadata/narrowMatch.md index e2d818aee..f16b0abb1 100644 --- a/ontology-metadata/narrowMatch.md +++ b/ontology-metadata/narrowMatch.md @@ -21,18 +21,18 @@ URI: [skos:narrowMatch](http://www.w3.org/2004/02/skos/core#narrowMatch) | Name | Description | Modifies Slot | | --- | --- | --- | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Property](Property.md) | | yes | | [HasMappings](HasMappings.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [Class](Class.md) | | yes | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/oneOf.md b/ontology-metadata/oneOf.md index 51977402d..6676d6ec6 100644 --- a/ontology-metadata/oneOf.md +++ b/ontology-metadata/oneOf.md @@ -21,9 +21,9 @@ URI: [owl:oneOf](http://www.w3.org/2002/07/owl#oneOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/ontology-metadata/ontology_term_requester.md b/ontology-metadata/ontology_term_requester.md index 412a513e4..81fac2dbd 100644 --- a/ontology-metadata/ontology_term_requester.md +++ b/ontology-metadata/ontology_term_requester.md @@ -21,18 +21,18 @@ URI: [IAO:0000234](http://purl.obolibrary.org/obo/IAO_0000234) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/page.md b/ontology-metadata/page.md index a0f04f245..43e75c6fe 100644 --- a/ontology-metadata/page.md +++ b/ontology-metadata/page.md @@ -21,18 +21,18 @@ URI: [foaf:page](http://xmlns.com/foaf/0.1/page) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/propertyChainAxiom.md b/ontology-metadata/propertyChainAxiom.md index 102cdb098..67424ca38 100644 --- a/ontology-metadata/propertyChainAxiom.md +++ b/ontology-metadata/propertyChainAxiom.md @@ -21,8 +21,8 @@ URI: [owl:propertyChainAxiom](http://www.w3.org/2002/07/owl#propertyChainAxiom) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/ontology-metadata/range.md b/ontology-metadata/range.md index 92abc8765..0544778a6 100644 --- a/ontology-metadata/range.md +++ b/ontology-metadata/range.md @@ -22,10 +22,10 @@ URI: [rdfs:range](http://www.w3.org/2000/01/rdf-schema#range) | Name | Description | Modifies Slot | | --- | --- | --- | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/seeAlso.md b/ontology-metadata/seeAlso.md index d7e8b3959..7f6db5503 100644 --- a/ontology-metadata/seeAlso.md +++ b/ontology-metadata/seeAlso.md @@ -16,19 +16,19 @@ URI: [rdfs:seeAlso](http://www.w3.org/2000/01/rdf-schema#seeAlso) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [HasUserInformation](HasUserInformation.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [HasUserInformation](HasUserInformation.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/shorthand.md b/ontology-metadata/shorthand.md index 5016fd3b4..060c28ff3 100644 --- a/ontology-metadata/shorthand.md +++ b/ontology-metadata/shorthand.md @@ -16,9 +16,9 @@ URI: [oio:shorthand](http://www.geneontology.org/formats/oboInOwl#shorthand) | Name | Description | Modifies Slot | | --- | --- | --- | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/ontology-metadata/should_conform_to.md b/ontology-metadata/should_conform_to.md index d1bae1035..1bdf74bfb 100644 --- a/ontology-metadata/should_conform_to.md +++ b/ontology-metadata/should_conform_to.md @@ -21,18 +21,18 @@ URI: [omoschema:should_conform_to](https://w3id.org/oak/ontology-metadata/should | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/ontology-metadata/source.md b/ontology-metadata/source.md index 1ef2e85ef..91cbc4649 100644 --- a/ontology-metadata/source.md +++ b/ontology-metadata/source.md @@ -21,8 +21,8 @@ URI: [dcterms:source](http://purl.org/dc/terms/source) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Ontology](Ontology.md) | An OWL ontology | no | | [Axiom](Axiom.md) | A logical or non-logical statement | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/ontology-metadata/subClassOf.md b/ontology-metadata/subClassOf.md index 053e1802d..96a5f0da2 100644 --- a/ontology-metadata/subClassOf.md +++ b/ontology-metadata/subClassOf.md @@ -21,9 +21,9 @@ URI: [rdfs:subClassOf](http://www.w3.org/2000/01/rdf-schema#subClassOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | yes | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/ontology-metadata/temporal_interpretation.md b/ontology-metadata/temporal_interpretation.md index a135e0baf..318299899 100644 --- a/ontology-metadata/temporal_interpretation.md +++ b/ontology-metadata/temporal_interpretation.md @@ -16,8 +16,8 @@ URI: [RO:0001900](http://purl.obolibrary.org/obo/RO_0001900) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | diff --git a/ontology-metadata/term_editor.md b/ontology-metadata/term_editor.md index ca1a7f2e8..de2233703 100644 --- a/ontology-metadata/term_editor.md +++ b/ontology-metadata/term_editor.md @@ -21,18 +21,18 @@ URI: [IAO:0000117](http://purl.obolibrary.org/obo/IAO_0000117) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/term_replaced_by.md b/ontology-metadata/term_replaced_by.md index 4e054b2c5..968da69db 100644 --- a/ontology-metadata/term_replaced_by.md +++ b/ontology-metadata/term_replaced_by.md @@ -21,18 +21,18 @@ URI: [IAO:0100001](http://purl.obolibrary.org/obo/IAO_0100001) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | -| [HasLifeCycle](HasLifeCycle.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | -| [Class](Class.md) | | no | | [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [HasLifeCycle](HasLifeCycle.md) | | no | diff --git a/ontology-metadata/term_tracker_item.md b/ontology-metadata/term_tracker_item.md index ae7bce31e..8c46127e4 100644 --- a/ontology-metadata/term_tracker_item.md +++ b/ontology-metadata/term_tracker_item.md @@ -21,18 +21,18 @@ URI: [IAO:0000233](http://purl.obolibrary.org/obo/IAO_0000233) | Name | Description | Modifies Slot | | --- | --- | --- | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | +| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | | [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | +| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | | [HasProvenance](HasProvenance.md) | | no | -| [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [Property](Property.md) | | no | | [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | diff --git a/ontology-metadata/type.md b/ontology-metadata/type.md index f131efe34..ab9c9917a 100644 --- a/ontology-metadata/type.md +++ b/ontology-metadata/type.md @@ -21,20 +21,20 @@ URI: [rdf:type](http://www.w3.org/1999/02/22-rdf-syntax-ns#type) | Name | Description | Modifies Slot | | --- | --- | --- | -| [NamedObject](NamedObject.md) | Anything with an IRI | no | -| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | -| [Property](Property.md) | | no | -| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | -| [Agent](Agent.md) | | no | -| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | | [Term](Term.md) | A NamedThing that includes classes, properties, but not ontologies | no | +| [AnnotationProperty](AnnotationProperty.md) | A property used in non-logical axioms | no | +| [TransitiveProperty](TransitiveProperty.md) | An ObjectProperty with the property of transitivity | no | | [Thing](Thing.md) | | no | -| [Class](Class.md) | | no | -| [Image](Image.md) | | no | -| [Ontology](Ontology.md) | An OWL ontology | no | -| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | | [ObjectProperty](ObjectProperty.md) | A property that connects two objects in logical axioms | no | +| [NamedIndividual](NamedIndividual.md) | An instance that has a IRI | no | +| [Image](Image.md) | | no | +| [Property](Property.md) | | no | +| [Class](Class.md) | | no | | [HomoSapiens](HomoSapiens.md) | An individual human being | no | +| [Agent](Agent.md) | | no | +| [Subset](Subset.md) | A collection of terms grouped for some purpose | no | +| [NamedObject](NamedObject.md) | Anything with an IRI | no | +| [Ontology](Ontology.md) | An OWL ontology | no | diff --git a/ontology-metadata/unionOf.md b/ontology-metadata/unionOf.md index 45bfe33d1..791e9ecc8 100644 --- a/ontology-metadata/unionOf.md +++ b/ontology-metadata/unionOf.md @@ -21,9 +21,9 @@ URI: [owl:unionOf](http://www.w3.org/2002/07/owl#unionOf) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ClassExpression](ClassExpression.md) | | no | -| [Restriction](Restriction.md) | | no | | [Class](Class.md) | | no | +| [Restriction](Restriction.md) | | no | +| [ClassExpression](ClassExpression.md) | | no | diff --git a/summary-statistics/id.md b/summary-statistics/id.md index 406a141b0..99859527b 100644 --- a/summary-statistics/id.md +++ b/summary-statistics/id.md @@ -16,12 +16,12 @@ URI: [summary_statistics:id](https://w3id.org/oaklib/summary_statistics.id) | Name | Description | Modifies Slot | | --- | --- | --- | -| [SummaryStatisticsReport](SummaryStatisticsReport.md) | abstract base class for all summary statistics reports | no | | [GroupedStatistics](GroupedStatistics.md) | summary statistics for the entire resource | no | +| [SummaryStatisticsReport](SummaryStatisticsReport.md) | abstract base class for all summary statistics reports | no | +| [ContributorRole](ContributorRole.md) | A role that a contributor can have | no | +| [UngroupedStatistics](UngroupedStatistics.md) | A summary statistics report object | no | | [Agent](Agent.md) | An agent | no | | [Ontology](Ontology.md) | An ontology | no | -| [UngroupedStatistics](UngroupedStatistics.md) | A summary statistics report object | no | -| [ContributorRole](ContributorRole.md) | A role that a contributor can have | no | diff --git a/taxon-constraints/id.md b/taxon-constraints/id.md index b7738b1ad..8a937a24d 100644 --- a/taxon-constraints/id.md +++ b/taxon-constraints/id.md @@ -21,10 +21,10 @@ URI: [tc:id](https://w3id.org/linkml/taxon_constraints/id) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Term](Term.md) | An ontology term | no | -| [SubjectTerm](SubjectTerm.md) | A term that is the subject of a taxon constraint | no | -| [Taxon](Taxon.md) | A term that represents a taxonomic group, may be at species level of a higher... | no | | [PredicateTerm](PredicateTerm.md) | A term that represents a relationship type | no | +| [Taxon](Taxon.md) | A term that represents a taxonomic group, may be at species level of a higher... | no | +| [SubjectTerm](SubjectTerm.md) | A term that is the subject of a taxon constraint | no | +| [Term](Term.md) | An ontology term | no | diff --git a/taxon-constraints/label.md b/taxon-constraints/label.md index 7546fd9dc..78683c28c 100644 --- a/taxon-constraints/label.md +++ b/taxon-constraints/label.md @@ -21,10 +21,10 @@ URI: [rdfs:label](http://www.w3.org/2000/01/rdf-schema#label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [Term](Term.md) | An ontology term | no | -| [SubjectTerm](SubjectTerm.md) | A term that is the subject of a taxon constraint | no | -| [Taxon](Taxon.md) | A term that represents a taxonomic group, may be at species level of a higher... | no | | [PredicateTerm](PredicateTerm.md) | A term that represents a relationship type | no | +| [Taxon](Taxon.md) | A term that represents a taxonomic group, may be at species level of a higher... | no | +| [SubjectTerm](SubjectTerm.md) | A term that is the subject of a taxon constraint | no | +| [Term](Term.md) | An ontology term | no | diff --git a/text-annotator/subject_end.md b/text-annotator/subject_end.md index 20c0707b2..d161bde14 100644 --- a/text-annotator/subject_end.md +++ b/text-annotator/subject_end.md @@ -16,8 +16,8 @@ URI: [ann:subject_end](https://w3id.org/linkml/text_annotator/subject_end) | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/text-annotator/subject_label.md b/text-annotator/subject_label.md index ab71b81bd..58117545c 100644 --- a/text-annotator/subject_label.md +++ b/text-annotator/subject_label.md @@ -21,8 +21,8 @@ URI: [ann:subject_label](https://w3id.org/linkml/text_annotator/subject_label) | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/text-annotator/subject_source.md b/text-annotator/subject_source.md index a483bfe2d..be42b1ff3 100644 --- a/text-annotator/subject_source.md +++ b/text-annotator/subject_source.md @@ -16,8 +16,8 @@ URI: [sssom:subject_source](http://w3id.org/sssom/subject_source) | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/text-annotator/subject_start.md b/text-annotator/subject_start.md index b65647c1f..46c36d570 100644 --- a/text-annotator/subject_start.md +++ b/text-annotator/subject_start.md @@ -16,8 +16,8 @@ URI: [ann:subject_start](https://w3id.org/linkml/text_annotator/subject_start) | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/text-annotator/subject_text_id.md b/text-annotator/subject_text_id.md index 6ac072152..37a81887b 100644 --- a/text-annotator/subject_text_id.md +++ b/text-annotator/subject_text_id.md @@ -16,8 +16,8 @@ URI: [ann:subject_text_id](https://w3id.org/linkml/text_annotator/subject_text_i | Name | Description | Modifies Slot | | --- | --- | --- | -| [HasSpan](HasSpan.md) | | no | | [TextAnnotation](TextAnnotation.md) | An individual text annotation | no | +| [HasSpan](HasSpan.md) | | no | diff --git a/validation/id.md b/validation/id.md index 453747867..a161bed8e 100644 --- a/validation/id.md +++ b/validation/id.md @@ -17,8 +17,8 @@ URI: [vm:id](https://w3id.org/linkml/validation-model/id) | Name | Description | Modifies Slot | | --- | --- | --- | | [Node](Node.md) | | no | -| [NamedResource](NamedResource.md) | | no | | [ConstraintComponent](ConstraintComponent.md) | | no | +| [NamedResource](NamedResource.md) | | no | diff --git a/validation/info.md b/validation/info.md index 48a4a2da3..974d837a3 100644 --- a/validation/info.md +++ b/validation/info.md @@ -22,10 +22,10 @@ URI: [sh:resultMessage](http://www.w3.org/ns/shacl#resultMessage) | Name | Description | Modifies Slot | | --- | --- | --- | | [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | | [MappingValidationResult](MappingValidationResult.md) | A validation result where the check is to determine if a mapping is correct | no | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | | [RepairOperation](RepairOperation.md) | The result of performing an individual repair | no | -| [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/validation/instantiates.md b/validation/instantiates.md index 3a5e8c295..c87a8d838 100644 --- a/validation/instantiates.md +++ b/validation/instantiates.md @@ -21,9 +21,9 @@ URI: [vm:instantiates](https://w3id.org/linkml/validation-model/instantiates) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/validation/object.md b/validation/object.md index 2e3592269..005d1b1b9 100644 --- a/validation/object.md +++ b/validation/object.md @@ -16,9 +16,9 @@ URI: [sh:value](http://www.w3.org/ns/shacl#value) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/validation/object_str.md b/validation/object_str.md index 840d518ef..3bd12e741 100644 --- a/validation/object_str.md +++ b/validation/object_str.md @@ -16,9 +16,9 @@ URI: [vm:object_str](https://w3id.org/linkml/validation-model/object_str) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/validation/predicate.md b/validation/predicate.md index 3f80dcdd1..1e06e442f 100644 --- a/validation/predicate.md +++ b/validation/predicate.md @@ -21,9 +21,9 @@ URI: [vm:predicate](https://w3id.org/linkml/validation-model/predicate) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/validation/results.md b/validation/results.md index af5b91fe3..80002c036 100644 --- a/validation/results.md +++ b/validation/results.md @@ -21,9 +21,9 @@ URI: [sh:result](http://www.w3.org/ns/shacl#result) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ValidationReport](ValidationReport.md) | A report that consists of validation results | yes | -| [Report](Report.md) | A report object that is a holder to multiple report results | no | | [RepairReport](RepairReport.md) | A report that consists of repair operation results | yes | +| [Report](Report.md) | A report object that is a holder to multiple report results | no | +| [ValidationReport](ValidationReport.md) | A report that consists of validation results | yes | diff --git a/validation/severity.md b/validation/severity.md index 6e6889306..988bf794f 100644 --- a/validation/severity.md +++ b/validation/severity.md @@ -21,10 +21,10 @@ URI: [sh:resultSeverity](http://www.w3.org/ns/shacl#resultSeverity) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | | [DefinitionValidationResult](DefinitionValidationResult.md) | | no | -| [TypeSeverityKeyValue](TypeSeverityKeyValue.md) | key-value pair that maps a validation result type to a severity setting, for ... | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [TypeSeverityKeyValue](TypeSeverityKeyValue.md) | key-value pair that maps a validation result type to a severity setting, for ... | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/validation/source.md b/validation/source.md index 0902c4d63..edad368de 100644 --- a/validation/source.md +++ b/validation/source.md @@ -16,9 +16,9 @@ URI: [vm:source](https://w3id.org/linkml/validation-model/source) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/validation/subject.md b/validation/subject.md index cdbab69a6..060e3bf89 100644 --- a/validation/subject.md +++ b/validation/subject.md @@ -21,9 +21,9 @@ URI: [sh:focusNode](http://www.w3.org/ns/shacl#focusNode) | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | -| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [DefinitionValidationResult](DefinitionValidationResult.md) | | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | diff --git a/validation/type.md b/validation/type.md index d1d7d06df..12654cf29 100644 --- a/validation/type.md +++ b/validation/type.md @@ -21,10 +21,10 @@ URI: [sh:sourceConstraintComponent](http://www.w3.org/ns/shacl#sourceConstraintC | Name | Description | Modifies Slot | | --- | --- | --- | -| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no | | [DefinitionValidationResult](DefinitionValidationResult.md) | | no | -| [TypeSeverityKeyValue](TypeSeverityKeyValue.md) | key-value pair that maps a validation result type to a severity setting, for ... | no | | [ValidationResult](ValidationResult.md) | An individual result arising from validation of a data instance using a parti... | no | +| [TypeSeverityKeyValue](TypeSeverityKeyValue.md) | key-value pair that maps a validation result type to a severity setting, for ... | no | +| [ExternalReferenceValidationResult](ExternalReferenceValidationResult.md) | A validation result where the check is to determine if a link to an external ... | no |