encode_utils

New Features:
-Added dry-run mode (#6). See examples on RTD.
-The Connection class can be instantiated with a custom host, i.e. a demo host (@hitz , #1)
-The DCC API keys are no longer required for using the Connection class. Useful for folks who just need to do search or get requests. (@hitz , #1)
-The call to the get() method in Connection.patch() now sets the argument frame=object, rather than the default frame of page, which is a significant speedup (@hitz , #7).

Other:
-Ran autopep8.py on the codebase to format according to PEP8 (@hitz #2).
-Documentation updates on RTD.

encode_utils

-Fixed installation issue where script eu_register.py wasn't included.
-Updated profiles.py module such that the new "@type" profile that is added by the DCC is ignored when fetching all profiles through profile.get_profiles().

encode_utils

-Bug fix in connection.Connection.get() where record identifiers with a starting '/', i.e. /files/ENCFF559ZUE/, weren't handled properly.
-Bug fix in connection.Connection.get_fastqfile_replicate_hash() where FASTQ File records with run_type='single-ended' caused a fatal error.

-Added new pre-POST hook in Connection() such that if a FASTQ file objct is being POSTED and the run_type='single-ended', it will check for the presence of the 'paired_end' key and remove it if present.

-Added several new scripts.

encode_utils

connection.Connection():
-Added error logging when a PATCH fails due to a 404.
-Deprecated send() method.
-bugfix in post(): If the key Connection.ENCID_KEY is present in the payload, it will now be removed.

eu_register.py:
-removed "-e" option.

encode_utils

1.0.0

Added connection.Connection.indexing() method.

encode_utils

0.4.0

few bug fixes

encode_utils

0.3.0

Fixed bug in setup.py

encode_utils

Merge branch 'master' of https://github.com/StanfordBioinformatics/en…

…code_utils

encode_utils

0.1.0

First release