diff --git a/poetry.lock b/poetry.lock
index b98db4fe..42eb4244 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -1,9 +1,10 @@
-# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand.
+# This file is automatically @generated by Poetry 1.4.2 and should not be changed by hand.
 
 [[package]]
 name = "accessible-pygments"
 version = "0.0.5"
 description = "A collection of accessible pygments styles"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -22,6 +23,7 @@ tests = ["hypothesis", "pytest"]
 name = "aiohappyeyeballs"
 version = "2.4.0"
 description = "Happy Eyeballs for asyncio"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -33,6 +35,7 @@ files = [
 name = "aiohttp"
 version = "3.10.5"
 description = "Async http client/server framework (asyncio)"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -145,6 +148,7 @@ speedups = ["Brotli", "aiodns (>=3.2.0)", "brotlicffi"]
 name = "aiosignal"
 version = "1.3.1"
 description = "aiosignal: a list of registered asynchronous callbacks"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -159,6 +163,7 @@ frozenlist = ">=1.1.0"
 name = "alabaster"
 version = "1.0.0"
 description = "A light, configurable Sphinx theme"
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
@@ -170,6 +175,7 @@ files = [
 name = "anyio"
 version = "4.4.0"
 description = "High level compatibility layer for multiple asynchronous event loop implementations"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -192,6 +198,7 @@ trio = ["trio (>=0.23)"]
 name = "appnope"
 version = "0.1.4"
 description = "Disable App Nap on macOS >= 10.9"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -203,6 +210,7 @@ files = [
 name = "argon2-cffi"
 version = "23.1.0"
 description = "Argon2 for Python"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -223,6 +231,7 @@ typing = ["mypy"]
 name = "argon2-cffi-bindings"
 version = "21.2.0"
 description = "Low-level CFFI bindings for Argon2"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -260,6 +269,7 @@ tests = ["pytest"]
 name = "arrow"
 version = "1.3.0"
 description = "Better dates & times for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -273,12 +283,13 @@ types-python-dateutil = ">=2.8.10"
 
 [package.extras]
 doc = ["doc8", "sphinx (>=7.0.0)", "sphinx-autobuild", "sphinx-autodoc-typehints", "sphinx_rtd_theme (>=1.3.0)"]
-test = ["dateparser (==1.*)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (==3.*)"]
+test = ["dateparser (>=1.0.0,<2.0.0)", "pre-commit", "pytest", "pytest-cov", "pytest-mock", "pytz (==2021.1)", "simplejson (>=3.0.0,<4.0.0)"]
 
 [[package]]
 name = "asciitree"
 version = "0.3.3"
 description = "Draws ASCII trees."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -289,6 +300,7 @@ files = [
 name = "asttokens"
 version = "2.4.1"
 description = "Annotate AST trees with source code positions"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -307,6 +319,7 @@ test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"]
 name = "async-lru"
 version = "2.0.4"
 description = "Simple LRU cache for asyncio"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -321,6 +334,7 @@ typing-extensions = {version = ">=4.0.0", markers = "python_version < \"3.11\""}
 name = "async-timeout"
 version = "4.0.3"
 description = "Timeout context manager for asyncio programs"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -332,6 +346,7 @@ files = [
 name = "attrs"
 version = "24.2.0"
 description = "Classes Without Boilerplate"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -351,6 +366,7 @@ tests-mypy = ["mypy (>=1.11.1)", "pytest-mypy-plugins"]
 name = "babel"
 version = "2.16.0"
 description = "Internationalization utilities"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -365,6 +381,7 @@ dev = ["freezegun (>=1.0,<2.0)", "pytest (>=6.0)", "pytest-cov"]
 name = "beautifulsoup4"
 version = "4.12.3"
 description = "Screen-scraping library"
+category = "main"
 optional = false
 python-versions = ">=3.6.0"
 files = [
@@ -386,6 +403,7 @@ lxml = ["lxml"]
 name = "biopython"
 version = "1.84"
 description = "Freely available tools for computational molecular biology."
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -421,24 +439,25 @@ numpy = "*"
 
 [[package]]
 name = "biotite"
-version = "1.0.0"
+version = "1.0.1"
 description = "A comprehensive library for computational molecular biology"
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
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+    {file = "biotite-1.0.1-cp312-cp312-win_amd64.whl", hash = "sha256:3cc6e834eee0e6a9b19fbf8caa1316ff432b613587fbadb8ea60e34fe80b8fc5"},
+    {file = "biotite-1.0.1.tar.gz", hash = "sha256:7012158431fd488c26d78d33032550eea1d7af7afd01b48549a7fd239f63dab5"},
 ]
 
 [package.dependencies]
@@ -449,12 +468,13 @@ numpy = ">=1.25"
 requests = ">=2.12"
 
 [package.extras]
-test = ["pytest"]
+test = ["pytest", "pytest-codspeed"]
 
 [[package]]
 name = "biotraj"
 version = "1.2.1"
 description = "Basic trajectory file format functionality for Biotite; forked from MDTraj"
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
@@ -485,6 +505,7 @@ test = ["netcdf4 (>=1.7.1)", "psutil", "pytest"]
 name = "bleach"
 version = "6.1.0"
 description = "An easy safelist-based HTML-sanitizing tool."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -503,6 +524,7 @@ css = ["tinycss2 (>=1.1.0,<1.3)"]
 name = "blinker"
 version = "1.8.2"
 description = "Fast, simple object-to-object and broadcast signaling"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -514,6 +536,7 @@ files = [
 name = "bokeh"
 version = "3.5.2"
 description = "Interactive plots and applications in the browser from Python"
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
@@ -536,6 +559,7 @@ xyzservices = ">=2021.09.1"
 name = "branca"
 version = "0.7.2"
 description = "Generate complex HTML+JS pages with Python"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -550,6 +574,7 @@ jinja2 = ">=3"
 name = "cachetools"
 version = "5.5.0"
 description = "Extensible memoizing collections and decorators"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -561,6 +586,7 @@ files = [
 name = "certifi"
 version = "2024.8.30"
 description = "Python package for providing Mozilla's CA Bundle."
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -570,78 +596,79 @@ files = [
 
 [[package]]
 name = "cffi"
-version = "1.17.0"
+version = "1.17.1"
 description = "Foreign Function Interface for Python calling C code."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
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+    {file = "cffi-1.17.1-cp39-cp39-manylinux_2_17_ppc64le.manylinux2014_ppc64le.whl", hash = "sha256:f7f5baafcc48261359e14bcd6d9bff6d4b28d9103847c9e136694cb0501aef87"},
+    {file = "cffi-1.17.1-cp39-cp39-manylinux_2_17_s390x.manylinux2014_s390x.whl", hash = "sha256:98e3969bcff97cae1b2def8ba499ea3d6f31ddfdb7635374834cf89a1a08ecf0"},
+    {file = "cffi-1.17.1-cp39-cp39-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:cdf5ce3acdfd1661132f2a9c19cac174758dc2352bfe37d98aa7512c6b7178b3"},
+    {file = "cffi-1.17.1-cp39-cp39-musllinux_1_1_aarch64.whl", hash = "sha256:9755e4345d1ec879e3849e62222a18c7174d65a6a92d5b346b1863912168b595"},
+    {file = "cffi-1.17.1-cp39-cp39-musllinux_1_1_i686.whl", hash = "sha256:f1e22e8c4419538cb197e4dd60acc919d7696e5ef98ee4da4e01d3f8cfa4cc5a"},
+    {file = "cffi-1.17.1-cp39-cp39-musllinux_1_1_x86_64.whl", hash = "sha256:c03e868a0b3bc35839ba98e74211ed2b05d2119be4e8a0f224fba9384f1fe02e"},
+    {file = "cffi-1.17.1-cp39-cp39-win32.whl", hash = "sha256:e31ae45bc2e29f6b2abd0de1cc3b9d5205aa847cafaecb8af1476a609a2f6eb7"},
+    {file = "cffi-1.17.1-cp39-cp39-win_amd64.whl", hash = "sha256:d016c76bdd850f3c626af19b0542c9677ba156e4ee4fccfdd7848803533ef662"},
+    {file = "cffi-1.17.1.tar.gz", hash = "sha256:1c39c6016c32bc48dd54561950ebd6836e1670f2ae46128f67cf49e789c52824"},
 ]
 
 [package.dependencies]
@@ -651,6 +678,7 @@ pycparser = "*"
 name = "cfgv"
 version = "3.4.0"
 description = "Validate configuration and produce human readable error messages."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -662,6 +690,7 @@ files = [
 name = "charset-normalizer"
 version = "3.3.2"
 description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet."
+category = "main"
 optional = false
 python-versions = ">=3.7.0"
 files = [
@@ -761,6 +790,7 @@ files = [
 name = "click"
 version = "8.1.7"
 description = "Composable command line interface toolkit"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -775,6 +805,7 @@ colorama = {version = "*", markers = "platform_system == \"Windows\""}
 name = "cloudpickle"
 version = "3.0.0"
 description = "Pickler class to extend the standard pickle.Pickler functionality"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -786,6 +817,7 @@ files = [
 name = "colorama"
 version = "0.4.6"
 description = "Cross-platform colored terminal text."
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7"
 files = [
@@ -797,6 +829,7 @@ files = [
 name = "comm"
 version = "0.2.2"
 description = "Jupyter Python Comm implementation, for usage in ipykernel, xeus-python etc."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -814,6 +847,7 @@ test = ["pytest"]
 name = "contourpy"
 version = "1.3.0"
 description = "Python library for calculating contours of 2D quadrilateral grids"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -898,6 +932,7 @@ test-no-images = ["pytest", "pytest-cov", "pytest-rerunfailures", "pytest-xdist"
 name = "coverage"
 version = "7.6.1"
 description = "Code coverage measurement for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -983,13 +1018,14 @@ toml = ["tomli"]
 
 [[package]]
 name = "dash"
-version = "2.17.1"
+version = "2.18.1"
 description = "A Python framework for building reactive web-apps. Developed by Plotly."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "dash-2.17.1-py3-none-any.whl", hash = "sha256:3eefc9ac67003f93a06bc3e500cae0a6787c48e6c81f6f61514239ae2da414e4"},
-    {file = "dash-2.17.1.tar.gz", hash = "sha256:ee2d9c319de5dcc1314085710b72cd5fa63ff994d913bf72979b7130daeea28e"},
+    {file = "dash-2.18.1-py3-none-any.whl", hash = "sha256:07c4513bb5f79a4b936847a0b49afc21dbd4b001ff77ea78d4d836043e211a07"},
+    {file = "dash-2.18.1.tar.gz", hash = "sha256:ffdf89690d734f6851ef1cb344222826ffb11ad2214ab9172668bf8aadd75d12"},
 ]
 
 [package.dependencies]
@@ -1018,6 +1054,7 @@ testing = ["beautifulsoup4 (>=4.8.2)", "cryptography", "dash-testing-stub (>=0.0
 name = "dash-core-components"
 version = "2.0.0"
 description = "Core component suite for Dash"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1029,6 +1066,7 @@ files = [
 name = "dash-cytoscape"
 version = "1.0.2"
 description = "A Component Library for Dash aimed at facilitating network visualization in Python, wrapped around Cytoscape.js"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1045,6 +1083,7 @@ leaflet = ["dash-leaflet (>=1.0.16rc3)"]
 name = "dash-html-components"
 version = "2.0.0"
 description = "Vanilla HTML components for Dash"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1056,6 +1095,7 @@ files = [
 name = "dash-table"
 version = "5.0.0"
 description = "Dash table"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1065,13 +1105,14 @@ files = [
 
 [[package]]
 name = "dask"
-version = "2024.8.1"
+version = "2024.9.0"
 description = "Parallel PyData with Task Scheduling"
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
-    {file = "dask-2024.8.1-py3-none-any.whl", hash = "sha256:b8b58cba91dc9c057c8676dcc80b8bc321602b4dfd21529d33b03b55d428e2c3"},
-    {file = "dask-2024.8.1.tar.gz", hash = "sha256:4254e43ac8c3affad2b22952f126b00a00f52c87caae91c068d8e395a4ad1a72"},
+    {file = "dask-2024.9.0-py3-none-any.whl", hash = "sha256:ceede9cfd418178a01ec3d11a0cde3f46678bd4a292ba84b57bbb401ce3f1cb8"},
+    {file = "dask-2024.9.0.tar.gz", hash = "sha256:bfbe5b6c3b7937426539be27029800178ce63cea4da8d7e7de836a98384aa1d6"},
 ]
 
 [package.dependencies]
@@ -1079,24 +1120,25 @@ click = ">=8.1"
 cloudpickle = ">=3.0.0"
 fsspec = ">=2021.09.0"
 importlib-metadata = {version = ">=4.13.0", markers = "python_version < \"3.12\""}
-numpy = {version = ">=1.21", optional = true, markers = "extra == \"array\""}
+numpy = {version = ">=1.24", optional = true, markers = "extra == \"array\""}
 packaging = ">=20.0"
 partd = ">=1.4.0"
 pyyaml = ">=5.3.1"
 toolz = ">=0.10.0"
 
 [package.extras]
-array = ["numpy (>=1.21)"]
-complete = ["dask[array,dataframe,diagnostics,distributed]", "lz4 (>=4.3.2)", "pyarrow (>=7.0)", "pyarrow-hotfix"]
+array = ["numpy (>=1.24)"]
+complete = ["dask[array,dataframe,diagnostics,distributed]", "lz4 (>=4.3.2)", "pyarrow (>=14.0.1)"]
 dataframe = ["dask-expr (>=1.1,<1.2)", "dask[array]", "pandas (>=2.0)"]
-diagnostics = ["bokeh (>=2.4.2)", "jinja2 (>=2.10.3)"]
-distributed = ["distributed (==2024.8.1)"]
+diagnostics = ["bokeh (>=3.1.0)", "jinja2 (>=2.10.3)"]
+distributed = ["distributed (==2024.9.0)"]
 test = ["pandas[test]", "pre-commit", "pytest", "pytest-cov", "pytest-rerunfailures", "pytest-timeout", "pytest-xdist"]
 
 [[package]]
 name = "debugpy"
 version = "1.8.5"
 description = "An implementation of the Debug Adapter Protocol for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1128,6 +1170,7 @@ files = [
 name = "decopatch"
 version = "1.4.10"
 description = "Create decorators easily in python."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1142,6 +1185,7 @@ makefun = ">=1.5.0"
 name = "decorator"
 version = "5.1.1"
 description = "Decorators for Humans"
+category = "main"
 optional = false
 python-versions = ">=3.5"
 files = [
@@ -1153,6 +1197,7 @@ files = [
 name = "defusedxml"
 version = "0.7.1"
 description = "XML bomb protection for Python stdlib modules"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -1164,6 +1209,7 @@ files = [
 name = "distlib"
 version = "0.3.8"
 description = "Distribution utilities"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1175,6 +1221,7 @@ files = [
 name = "docutils"
 version = "0.21.2"
 description = "Docutils -- Python Documentation Utilities"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -1186,6 +1233,7 @@ files = [
 name = "exceptiongroup"
 version = "1.2.2"
 description = "Backport of PEP 654 (exception groups)"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1200,6 +1248,7 @@ test = ["pytest (>=6)"]
 name = "execnet"
 version = "2.1.1"
 description = "execnet: rapid multi-Python deployment"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1212,13 +1261,14 @@ testing = ["hatch", "pre-commit", "pytest", "tox"]
 
 [[package]]
 name = "executing"
-version = "2.0.1"
+version = "2.1.0"
 description = "Get the currently executing AST node of a frame, and other information"
+category = "main"
 optional = false
-python-versions = ">=3.5"
+python-versions = ">=3.8"
 files = [
-    {file = "executing-2.0.1-py2.py3-none-any.whl", hash = "sha256:eac49ca94516ccc753f9fb5ce82603156e590b27525a8bc32cce8ae302eb61bc"},
-    {file = "executing-2.0.1.tar.gz", hash = "sha256:35afe2ce3affba8ee97f2d69927fa823b08b472b7b994e36a52a964b93d16147"},
+    {file = "executing-2.1.0-py2.py3-none-any.whl", hash = "sha256:8d63781349375b5ebccc3142f4b30350c0cd9c79f921cde38be2be4637e98eaf"},
+    {file = "executing-2.1.0.tar.gz", hash = "sha256:8ea27ddd260da8150fa5a708269c4a10e76161e2496ec3e587da9e3c0fe4b9ab"},
 ]
 
 [package.extras]
@@ -1228,6 +1278,7 @@ tests = ["asttokens (>=2.1.0)", "coverage", "coverage-enable-subprocess", "ipyth
 name = "fasteners"
 version = "0.19"
 description = "A python package that provides useful locks"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1239,6 +1290,7 @@ files = [
 name = "fastjsonschema"
 version = "2.20.0"
 description = "Fastest Python implementation of JSON schema"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1251,24 +1303,26 @@ devel = ["colorama", "json-spec", "jsonschema", "pylint", "pytest", "pytest-benc
 
 [[package]]
 name = "filelock"
-version = "3.15.4"
+version = "3.16.0"
 description = "A platform independent file lock."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "filelock-3.15.4-py3-none-any.whl", hash = "sha256:6ca1fffae96225dab4c6eaf1c4f4f28cd2568d3ec2a44e15a08520504de468e7"},
-    {file = "filelock-3.15.4.tar.gz", hash = "sha256:2207938cbc1844345cb01a5a95524dae30f0ce089eba5b00378295a17e3e90cb"},
+    {file = "filelock-3.16.0-py3-none-any.whl", hash = "sha256:f6ed4c963184f4c84dd5557ce8fece759a3724b37b80c6c4f20a2f63a4dc6609"},
+    {file = "filelock-3.16.0.tar.gz", hash = "sha256:81de9eb8453c769b63369f87f11131a7ab04e367f8d97ad39dc230daa07e3bec"},
 ]
 
 [package.extras]
-docs = ["furo (>=2023.9.10)", "sphinx (>=7.2.6)", "sphinx-autodoc-typehints (>=1.25.2)"]
-testing = ["covdefaults (>=2.3)", "coverage (>=7.3.2)", "diff-cover (>=8.0.1)", "pytest (>=7.4.3)", "pytest-asyncio (>=0.21)", "pytest-cov (>=4.1)", "pytest-mock (>=3.12)", "pytest-timeout (>=2.2)", "virtualenv (>=20.26.2)"]
-typing = ["typing-extensions (>=4.8)"]
+docs = ["furo (>=2024.8.6)", "sphinx (>=8.0.2)", "sphinx-autodoc-typehints (>=2.4)"]
+testing = ["covdefaults (>=2.3)", "coverage (>=7.6.1)", "diff-cover (>=9.1.1)", "pytest (>=8.3.2)", "pytest-asyncio (>=0.24)", "pytest-cov (>=5)", "pytest-mock (>=3.14)", "pytest-timeout (>=2.3.1)", "virtualenv (>=20.26.3)"]
+typing = ["typing-extensions (>=4.12.2)"]
 
 [[package]]
 name = "flask"
 version = "3.0.3"
 description = "A simple framework for building complex web applications."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1291,6 +1345,7 @@ dotenv = ["python-dotenv"]
 name = "fqdn"
 version = "1.5.1"
 description = "Validates fully-qualified domain names against RFC 1123, so that they are acceptable to modern bowsers"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0, !=3.1, !=3.2, !=3.3, !=3.4, <4"
 files = [
@@ -1302,6 +1357,7 @@ files = [
 name = "frozenlist"
 version = "1.4.1"
 description = "A list-like structure which implements collections.abc.MutableSequence"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1386,13 +1442,14 @@ files = [
 
 [[package]]
 name = "fsspec"
-version = "2024.6.1"
+version = "2024.9.0"
 description = "File-system specification"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "fsspec-2024.6.1-py3-none-any.whl", hash = "sha256:3cb443f8bcd2efb31295a5b9fdb02aee81d8452c80d28f97a6d0959e6cee101e"},
-    {file = "fsspec-2024.6.1.tar.gz", hash = "sha256:fad7d7e209dd4c1208e3bbfda706620e0da5142bebbd9c384afb95b07e798e49"},
+    {file = "fsspec-2024.9.0-py3-none-any.whl", hash = "sha256:a0947d552d8a6efa72cc2c730b12c41d043509156966cca4fb157b0f2a0c574b"},
+    {file = "fsspec-2024.9.0.tar.gz", hash = "sha256:4b0afb90c2f21832df142f292649035d80b421f60a9e1c027802e5a0da2b04e8"},
 ]
 
 [package.extras]
@@ -1425,19 +1482,20 @@ tqdm = ["tqdm"]
 
 [[package]]
 name = "gcsfs"
-version = "2024.6.1"
+version = "2024.9.0.post1"
 description = "Convenient Filesystem interface over GCS"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "gcsfs-2024.6.1-py2.py3-none-any.whl", hash = "sha256:13fd18095425e54e248870594fd155812723966b1bda3b102b3a5c44ec436a03"},
-    {file = "gcsfs-2024.6.1.tar.gz", hash = "sha256:e8858c7a893b2265e9bfce2fe270a024a2e348c74c23528801db388fc0224ed7"},
+    {file = "gcsfs-2024.9.0.post1-py2.py3-none-any.whl", hash = "sha256:f3ab9d3bedc45da8cf40baed7c3a1e1694e8f599160d9138d78f0ef25e4a3ca1"},
+    {file = "gcsfs-2024.9.0.post1.tar.gz", hash = "sha256:7ca70ee9d7c7dbce1a3e36b4883e14102c2d7b4284f49e242843a437bc684684"},
 ]
 
 [package.dependencies]
 aiohttp = "<4.0.0a0 || >4.0.0a0,<4.0.0a1 || >4.0.0a1"
 decorator = ">4.1.2"
-fsspec = "2024.6.1"
+fsspec = "2024.9.0"
 google-auth = ">=1.2"
 google-auth-oauthlib = "*"
 google-cloud-storage = "*"
@@ -1451,6 +1509,7 @@ gcsfuse = ["fusepy"]
 name = "google-api-core"
 version = "2.19.2"
 description = "Google API client core library"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1474,6 +1533,7 @@ grpcio-gcp = ["grpcio-gcp (>=0.2.2,<1.0.dev0)"]
 name = "google-auth"
 version = "2.34.0"
 description = "Google Authentication Library"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1497,6 +1557,7 @@ requests = ["requests (>=2.20.0,<3.0.0.dev0)"]
 name = "google-auth-oauthlib"
 version = "1.2.1"
 description = "Google Authentication Library"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1515,6 +1576,7 @@ tool = ["click (>=6.0.0)"]
 name = "google-cloud-core"
 version = "2.4.1"
 description = "Google Cloud API client core library"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1523,7 +1585,7 @@ files = [
 ]
 
 [package.dependencies]
-google-api-core = ">=1.31.6,<2.0.dev0 || >2.3.0,<3.0.0dev"
+google-api-core = ">=1.31.6,<2.0.0 || >2.3.0,<3.0.0dev"
 google-auth = ">=1.25.0,<3.0dev"
 
 [package.extras]
@@ -1533,6 +1595,7 @@ grpc = ["grpcio (>=1.38.0,<2.0dev)", "grpcio-status (>=1.38.0,<2.0.dev0)"]
 name = "google-cloud-storage"
 version = "2.18.2"
 description = "Google Cloud Storage API client library"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1554,79 +1617,39 @@ tracing = ["opentelemetry-api (>=1.1.0)"]
 
 [[package]]
 name = "google-crc32c"
-version = "1.5.0"
+version = "1.6.0"
 description = "A python wrapper of the C library 'Google CRC32C'"
+category = "main"
 optional = false
-python-versions = ">=3.7"
+python-versions = ">=3.9"
 files = [
-    {file = "google-crc32c-1.5.0.tar.gz", hash = "sha256:89284716bc6a5a415d4eaa11b1726d2d60a0cd12aadf5439828353662ede9dd7"},
-    {file = "google_crc32c-1.5.0-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:596d1f98fc70232fcb6590c439f43b350cb762fb5d61ce7b0e9db4539654cc13"},
-    {file = "google_crc32c-1.5.0-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:be82c3c8cfb15b30f36768797a640e800513793d6ae1724aaaafe5bf86f8f346"},
-    {file = "google_crc32c-1.5.0-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:461665ff58895f508e2866824a47bdee72497b091c730071f2b7575d5762ab65"},
-    {file = "google_crc32c-1.5.0-cp310-cp310-manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:e2096eddb4e7c7bdae4bd69ad364e55e07b8316653234a56552d9c988bd2d61b"},
-    {file = "google_crc32c-1.5.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:116a7c3c616dd14a3de8c64a965828b197e5f2d121fedd2f8c5585c547e87b02"},
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 [package.extras]
@@ -1636,6 +1659,7 @@ testing = ["pytest"]
 name = "google-resumable-media"
 version = "2.7.2"
 description = "Utilities for Google Media Downloads and Resumable Uploads"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1654,6 +1678,7 @@ requests = ["requests (>=2.18.0,<3.0.0dev)"]
 name = "googleapis-common-protos"
 version = "1.65.0"
 description = "Common protobufs used in Google APIs"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1671,6 +1696,7 @@ grpc = ["grpcio (>=1.44.0,<2.0.0.dev0)"]
 name = "h11"
 version = "0.14.0"
 description = "A pure-Python, bring-your-own-I/O implementation of HTTP/1.1"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1682,6 +1708,7 @@ files = [
 name = "httpcore"
 version = "1.0.5"
 description = "A minimal low-level HTTP client."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1696,13 +1723,14 @@ h11 = ">=0.13,<0.15"
 [package.extras]
 asyncio = ["anyio (>=4.0,<5.0)"]
 http2 = ["h2 (>=3,<5)"]
-socks = ["socksio (==1.*)"]
+socks = ["socksio (>=1.0.0,<2.0.0)"]
 trio = ["trio (>=0.22.0,<0.26.0)"]
 
 [[package]]
 name = "httpx"
 version = "0.27.2"
 description = "The next generation HTTP client."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1713,26 +1741,27 @@ files = [
 [package.dependencies]
 anyio = "*"
 certifi = "*"
-httpcore = "==1.*"
+httpcore = ">=1.0.0,<2.0.0"
 idna = "*"
 sniffio = "*"
 
 [package.extras]
 brotli = ["brotli", "brotlicffi"]
-cli = ["click (==8.*)", "pygments (==2.*)", "rich (>=10,<14)"]
+cli = ["click (>=8.0.0,<9.0.0)", "pygments (>=2.0.0,<3.0.0)", "rich (>=10,<14)"]
 http2 = ["h2 (>=3,<5)"]
-socks = ["socksio (==1.*)"]
+socks = ["socksio (>=1.0.0,<2.0.0)"]
 zstd = ["zstandard (>=0.18.0)"]
 
 [[package]]
 name = "identify"
-version = "2.6.0"
+version = "2.6.1"
 description = "File identification library for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "identify-2.6.0-py2.py3-none-any.whl", hash = "sha256:e79ae4406387a9d300332b5fd366d8994f1525e8414984e1a59e058b2eda2dd0"},
-    {file = "identify-2.6.0.tar.gz", hash = "sha256:cb171c685bdc31bcc4c1734698736a7d5b6c8bf2e0c15117f4d469c8640ae5cf"},
+    {file = "identify-2.6.1-py2.py3-none-any.whl", hash = "sha256:53863bcac7caf8d2ed85bd20312ea5dcfc22226800f6d6881f232d861db5a8f0"},
+    {file = "identify-2.6.1.tar.gz", hash = "sha256:91478c5fb7c3aac5ff7bf9b4344f803843dc586832d5f110d672b19aa1984c98"},
 ]
 
 [package.extras]
@@ -1740,19 +1769,24 @@ license = ["ukkonen"]
 
 [[package]]
 name = "idna"
-version = "3.8"
+version = "3.10"
 description = "Internationalized Domain Names in Applications (IDNA)"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
-    {file = "idna-3.8-py3-none-any.whl", hash = "sha256:050b4e5baadcd44d760cedbd2b8e639f2ff89bbc7a5730fcc662954303377aac"},
-    {file = "idna-3.8.tar.gz", hash = "sha256:d838c2c0ed6fced7693d5e8ab8e734d5f8fda53a039c0164afb0b82e771e3603"},
+    {file = "idna-3.10-py3-none-any.whl", hash = "sha256:946d195a0d259cbba61165e88e65941f16e9b36ea6ddb97f00452bae8b1287d3"},
+    {file = "idna-3.10.tar.gz", hash = "sha256:12f65c9b470abda6dc35cf8e63cc574b1c52b11df2c86030af0ac09b01b13ea9"},
 ]
 
+[package.extras]
+all = ["flake8 (>=7.1.1)", "mypy (>=1.11.2)", "pytest (>=8.3.2)", "ruff (>=0.6.2)"]
+
 [[package]]
 name = "igv-notebook"
 version = "0.5.2"
 description = "Package for embedding the igv.js genome visualization in IPython notebooks"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -1769,6 +1803,7 @@ requests = "*"
 name = "imagesize"
 version = "1.4.1"
 description = "Getting image size from png/jpeg/jpeg2000/gif file"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -1778,27 +1813,33 @@ files = [
 
 [[package]]
 name = "importlib-metadata"
-version = "8.4.0"
+version = "8.5.0"
 description = "Read metadata from Python packages"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "importlib_metadata-8.4.0-py3-none-any.whl", hash = "sha256:66f342cc6ac9818fc6ff340576acd24d65ba0b3efabb2b4ac08b598965a4a2f1"},
-    {file = "importlib_metadata-8.4.0.tar.gz", hash = "sha256:9a547d3bc3608b025f93d403fdd1aae741c24fbb8314df4b155675742ce303c5"},
+    {file = "importlib_metadata-8.5.0-py3-none-any.whl", hash = "sha256:45e54197d28b7a7f1559e60b95e7c567032b602131fbd588f1497f47880aa68b"},
+    {file = "importlib_metadata-8.5.0.tar.gz", hash = "sha256:71522656f0abace1d072b9e5481a48f07c138e00f079c38c8f883823f9c26bd7"},
 ]
 
 [package.dependencies]
-zipp = ">=0.5"
+zipp = ">=3.20"
 
 [package.extras]
+check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)"]
+cover = ["pytest-cov"]
 doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-lint"]
+enabler = ["pytest-enabler (>=2.2)"]
 perf = ["ipython"]
-test = ["flufl.flake8", "importlib-resources (>=1.3)", "jaraco.test (>=5.4)", "packaging", "pyfakefs", "pytest (>=6,!=8.1.*)", "pytest-checkdocs (>=2.4)", "pytest-cov", "pytest-enabler (>=2.2)", "pytest-mypy", "pytest-perf (>=0.9.2)", "pytest-ruff (>=0.2.1)"]
+test = ["flufl.flake8", "importlib-resources (>=1.3)", "jaraco.test (>=5.4)", "packaging", "pyfakefs", "pytest (>=6,!=8.1.*)", "pytest-perf (>=0.9.2)"]
+type = ["pytest-mypy"]
 
 [[package]]
 name = "iniconfig"
 version = "2.0.0"
 description = "brain-dead simple config-ini parsing"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1808,13 +1849,14 @@ files = [
 
 [[package]]
 name = "ipinfo"
-version = "5.0.1"
+version = "5.1.1"
 description = "Official Python library for IPInfo"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
-    {file = "ipinfo-5.0.1-py3-none-any.whl", hash = "sha256:9441238cfc4abb5460d4fa4949d706809138256f6590d391418ae3907e7fefa1"},
-    {file = "ipinfo-5.0.1.tar.gz", hash = "sha256:3e8a600849e24f99e4196a62e6bbead891f9a51fffee64c726c609de4c31d0e5"},
+    {file = "ipinfo-5.1.1-py3-none-any.whl", hash = "sha256:90b2f5400189dd2da7625c9151d7076879a8cac9c31bfb581689345fac34cceb"},
+    {file = "ipinfo-5.1.1.tar.gz", hash = "sha256:be5a33adac9681bc68280eb5aae16a83e4abbb5f192c87dcc5ee18bdd0ceb276"},
 ]
 
 [package.dependencies]
@@ -1826,6 +1868,7 @@ requests = "*"
 name = "ipykernel"
 version = "6.29.5"
 description = "IPython Kernel for Jupyter"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1839,7 +1882,7 @@ comm = ">=0.1.1"
 debugpy = ">=1.6.5"
 ipython = ">=7.23.1"
 jupyter-client = ">=6.1.12"
-jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
+jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
 matplotlib-inline = ">=0.1"
 nest-asyncio = "*"
 packaging = "*"
@@ -1859,6 +1902,7 @@ test = ["flaky", "ipyparallel", "pre-commit", "pytest (>=7.0)", "pytest-asyncio
 name = "ipyleaflet"
 version = "0.19.2"
 description = "A Jupyter widget for dynamic Leaflet maps"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1877,6 +1921,7 @@ xyzservices = ">=2021.8.1"
 name = "ipython"
 version = "8.27.0"
 description = "IPython: Productive Interactive Computing"
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
@@ -1915,6 +1960,7 @@ test-extra = ["curio", "ipython[test]", "matplotlib (!=3.2.0)", "nbformat", "num
 name = "ipywidgets"
 version = "8.1.5"
 description = "Jupyter interactive widgets"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1936,6 +1982,7 @@ test = ["ipykernel", "jsonschema", "pytest (>=3.6.0)", "pytest-cov", "pytz"]
 name = "isoduration"
 version = "20.11.0"
 description = "Operations with ISO 8601 durations"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1950,6 +1997,7 @@ arrow = ">=0.15.0"
 name = "itsdangerous"
 version = "2.2.0"
 description = "Safely pass data to untrusted environments and back."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -1961,6 +2009,7 @@ files = [
 name = "jedi"
 version = "0.19.1"
 description = "An autocompletion tool for Python that can be used for text editors."
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -1980,6 +2029,7 @@ testing = ["Django", "attrs", "colorama", "docopt", "pytest (<7.0.0)"]
 name = "jinja2"
 version = "3.1.4"
 description = "A very fast and expressive template engine."
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -1997,6 +2047,7 @@ i18n = ["Babel (>=2.7)"]
 name = "joblib"
 version = "1.4.2"
 description = "Lightweight pipelining with Python functions"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2008,6 +2059,7 @@ files = [
 name = "json5"
 version = "0.9.25"
 description = "A Python implementation of the JSON5 data format."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2019,6 +2071,7 @@ files = [
 name = "jsonpointer"
 version = "3.0.0"
 description = "Identify specific nodes in a JSON document (RFC 6901)"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2030,6 +2083,7 @@ files = [
 name = "jsonschema"
 version = "4.23.0"
 description = "An implementation of JSON Schema validation for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2059,6 +2113,7 @@ format-nongpl = ["fqdn", "idna", "isoduration", "jsonpointer (>1.13)", "rfc3339-
 name = "jsonschema-specifications"
 version = "2023.12.1"
 description = "The JSON Schema meta-schemas and vocabularies, exposed as a Registry"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2073,6 +2128,7 @@ referencing = ">=0.31.0"
 name = "jupyter-client"
 version = "8.6.2"
 description = "Jupyter protocol implementation and client libraries"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2081,7 +2137,7 @@ files = [
 ]
 
 [package.dependencies]
-jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
+jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
 python-dateutil = ">=2.8.2"
 pyzmq = ">=23.0"
 tornado = ">=6.2"
@@ -2095,6 +2151,7 @@ test = ["coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-commit", "pyt
 name = "jupyter-core"
 version = "5.7.2"
 description = "Jupyter core package. A base package on which Jupyter projects rely."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2115,6 +2172,7 @@ test = ["ipykernel", "pre-commit", "pytest (<8)", "pytest-cov", "pytest-timeout"
 name = "jupyter-events"
 version = "0.10.0"
 description = "Jupyter Event System library"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2140,6 +2198,7 @@ test = ["click", "pre-commit", "pytest (>=7.0)", "pytest-asyncio (>=0.19.0)", "p
 name = "jupyter-leaflet"
 version = "0.19.2"
 description = "ipyleaflet extensions for JupyterLab and Jupyter Notebook"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2151,6 +2210,7 @@ files = [
 name = "jupyter-lsp"
 version = "2.2.5"
 description = "Multi-Language Server WebSocket proxy for Jupyter Notebook/Lab server"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2165,6 +2225,7 @@ jupyter-server = ">=1.1.2"
 name = "jupyter-server"
 version = "2.14.2"
 description = "The backend—i.e. core services, APIs, and REST endpoints—to Jupyter web applications."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2177,7 +2238,7 @@ anyio = ">=3.1.0"
 argon2-cffi = ">=21.1"
 jinja2 = ">=3.0.3"
 jupyter-client = ">=7.4.4"
-jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
+jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
 jupyter-events = ">=0.9.0"
 jupyter-server-terminals = ">=0.4.4"
 nbconvert = ">=6.4.4"
@@ -2201,6 +2262,7 @@ test = ["flaky", "ipykernel", "pre-commit", "pytest (>=7.0,<9)", "pytest-console
 name = "jupyter-server-terminals"
 version = "0.5.3"
 description = "A Jupyter Server Extension Providing Terminals."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2220,6 +2282,7 @@ test = ["jupyter-server (>=2.0.0)", "pytest (>=7.0)", "pytest-jupyter[server] (>
 name = "jupyterlab"
 version = "4.2.5"
 description = "JupyterLab computational environment"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2254,6 +2317,7 @@ upgrade-extension = ["copier (>=9,<10)", "jinja2-time (<0.3)", "pydantic (<3.0)"
 name = "jupyterlab-pygments"
 version = "0.3.0"
 description = "Pygments theme using JupyterLab CSS variables"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2265,6 +2329,7 @@ files = [
 name = "jupyterlab-server"
 version = "2.27.3"
 description = "A set of server components for JupyterLab and JupyterLab like applications."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2290,6 +2355,7 @@ test = ["hatch", "ipykernel", "openapi-core (>=0.18.0,<0.19.0)", "openapi-spec-v
 name = "jupyterlab-widgets"
 version = "3.0.13"
 description = "Jupyter interactive widgets for JupyterLab"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2301,6 +2367,7 @@ files = [
 name = "llvmlite"
 version = "0.43.0"
 description = "lightweight wrapper around basic LLVM functionality"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -2331,6 +2398,7 @@ files = [
 name = "locket"
 version = "1.0.0"
 description = "File-based locks for Python on Linux and Windows"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -2342,6 +2410,7 @@ files = [
 name = "makefun"
 version = "1.15.4"
 description = "Small library to dynamically create python functions."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -2353,6 +2422,7 @@ files = [
 name = "markupsafe"
 version = "2.1.5"
 description = "Safely add untrusted strings to HTML/XML markup."
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2422,6 +2492,7 @@ files = [
 name = "matplotlib-inline"
 version = "0.1.7"
 description = "Inline Matplotlib backend for Jupyter"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2436,6 +2507,7 @@ traitlets = "*"
 name = "memory-profiler"
 version = "0.61.0"
 description = "A module for monitoring memory usage of a python program"
+category = "main"
 optional = false
 python-versions = ">=3.5"
 files = [
@@ -2450,6 +2522,7 @@ psutil = "*"
 name = "mistune"
 version = "3.0.2"
 description = "A sane and fast Markdown parser with useful plugins and renderers"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2459,172 +2532,188 @@ files = [
 
 [[package]]
 name = "msgpack"
-version = "1.0.8"
+version = "1.1.0"
 description = "MessagePack serializer"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "msgpack-1.0.8-cp310-cp310-macosx_10_9_universal2.whl", hash = "sha256:505fe3d03856ac7d215dbe005414bc28505d26f0c128906037e66d98c4e95868"},
-    {file = "msgpack-1.0.8-cp310-cp310-macosx_10_9_x86_64.whl", hash = "sha256:e6b7842518a63a9f17107eb176320960ec095a8ee3b4420b5f688e24bf50c53c"},
-    {file = "msgpack-1.0.8-cp310-cp310-macosx_11_0_arm64.whl", hash = "sha256:376081f471a2ef24828b83a641a02c575d6103a3ad7fd7dade5486cad10ea659"},
-    {file = "msgpack-1.0.8-cp310-cp310-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:5e390971d082dba073c05dbd56322427d3280b7cc8b53484c9377adfbae67dc2"},
-    {file = "msgpack-1.0.8-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:00e073efcba9ea99db5acef3959efa45b52bc67b61b00823d2a1a6944bf45982"},
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-    {file = "msgpack-1.0.8-cp310-cp310-musllinux_1_1_aarch64.whl", hash = "sha256:9ee32dcb8e531adae1f1ca568822e9b3a738369b3b686d1477cbc643c4a9c128"},
-    {file = "msgpack-1.0.8-cp310-cp310-musllinux_1_1_i686.whl", hash = "sha256:e3aa7e51d738e0ec0afbed661261513b38b3014754c9459508399baf14ae0c9d"},
-    {file = "msgpack-1.0.8-cp310-cp310-musllinux_1_1_x86_64.whl", hash = "sha256:69284049d07fce531c17404fcba2bb1df472bc2dcdac642ae71a2d079d950653"},
-    {file = "msgpack-1.0.8-cp310-cp310-win32.whl", hash = "sha256:13577ec9e247f8741c84d06b9ece5f654920d8365a4b636ce0e44f15e07ec693"},
-    {file = "msgpack-1.0.8-cp310-cp310-win_amd64.whl", hash = "sha256:e532dbd6ddfe13946de050d7474e3f5fb6ec774fbb1a188aaf469b08cf04189a"},
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-    {file = "msgpack-1.0.8-cp311-cp311-manylinux_2_17_aarch64.manylinux2014_aarch64.whl", hash = "sha256:5c330eace3dd100bdb54b5653b966de7f51c26ec4a7d4e87132d9b4f738220ba"},
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+    {file = "multidict-6.1.0-cp39-cp39-manylinux_2_5_i686.manylinux1_i686.manylinux_2_17_i686.manylinux2014_i686.whl", hash = "sha256:483a6aea59cb89904e1ceabd2b47368b5600fb7de78a6e4a2c2987b2d256cf30"},
+    {file = "multidict-6.1.0-cp39-cp39-musllinux_1_2_aarch64.whl", hash = "sha256:87701f25a2352e5bf7454caa64757642734da9f6b11384c1f9d1a8e699758057"},
+    {file = "multidict-6.1.0-cp39-cp39-musllinux_1_2_i686.whl", hash = "sha256:682b987361e5fd7a139ed565e30d81fd81e9629acc7d925a205366877d8c8657"},
+    {file = "multidict-6.1.0-cp39-cp39-musllinux_1_2_ppc64le.whl", hash = "sha256:ce2186a7df133a9c895dea3331ddc5ddad42cdd0d1ea2f0a51e5d161e4762f28"},
+    {file = "multidict-6.1.0-cp39-cp39-musllinux_1_2_s390x.whl", hash = "sha256:9f636b730f7e8cb19feb87094949ba54ee5357440b9658b2a32a5ce4bce53972"},
+    {file = "multidict-6.1.0-cp39-cp39-musllinux_1_2_x86_64.whl", hash = "sha256:73eae06aa53af2ea5270cc066dcaf02cc60d2994bbb2c4ef5764949257d10f43"},
+    {file = "multidict-6.1.0-cp39-cp39-win32.whl", hash = "sha256:1ca0083e80e791cffc6efce7660ad24af66c8d4079d2a750b29001b53ff59ada"},
+    {file = "multidict-6.1.0-cp39-cp39-win_amd64.whl", hash = "sha256:aa466da5b15ccea564bdab9c89175c762bc12825f4659c11227f515cee76fa4a"},
+    {file = "multidict-6.1.0-py3-none-any.whl", hash = "sha256:48e171e52d1c4d33888e529b999e5900356b9ae588c2f09a52dcefb158b27506"},
+    {file = "multidict-6.1.0.tar.gz", hash = "sha256:22ae2ebf9b0c69d206c003e2f6a914ea33f0a932d4aa16f236afc049d9958f4a"},
 ]
 
+[package.dependencies]
+typing-extensions = {version = ">=4.1.0", markers = "python_version < \"3.11\""}
+
 [[package]]
 name = "mypy"
 version = "1.11.2"
 description = "Optional static typing for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2672,6 +2761,7 @@ reports = ["lxml"]
 name = "mypy-extensions"
 version = "1.0.0"
 description = "Type system extensions for programs checked with the mypy type checker."
+category = "main"
 optional = false
 python-versions = ">=3.5"
 files = [
@@ -2683,6 +2773,7 @@ files = [
 name = "nbclient"
 version = "0.10.0"
 description = "A client library for executing notebooks. Formerly nbconvert's ExecutePreprocessor."
+category = "main"
 optional = false
 python-versions = ">=3.8.0"
 files = [
@@ -2692,7 +2783,7 @@ files = [
 
 [package.dependencies]
 jupyter-client = ">=6.1.12"
-jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
+jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
 nbformat = ">=5.1"
 traitlets = ">=5.4"
 
@@ -2705,6 +2796,7 @@ test = ["flaky", "ipykernel (>=6.19.3)", "ipython", "ipywidgets", "nbconvert (>=
 name = "nbconvert"
 version = "7.16.4"
 description = "Converting Jupyter Notebooks (.ipynb files) to other formats.  Output formats include asciidoc, html, latex, markdown, pdf, py, rst, script.  nbconvert can be used both as a Python library (`import nbconvert`) or as a command line tool (invoked as `jupyter nbconvert ...`)."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2742,6 +2834,7 @@ webpdf = ["playwright"]
 name = "nbformat"
 version = "5.10.4"
 description = "The Jupyter Notebook format"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2752,7 +2845,7 @@ files = [
 [package.dependencies]
 fastjsonschema = ">=2.15"
 jsonschema = ">=2.6"
-jupyter-core = ">=4.12,<5.0.dev0 || >=5.1.dev0"
+jupyter-core = ">=4.12,<5.0.0 || >=5.1.0"
 traitlets = ">=5.1"
 
 [package.extras]
@@ -2763,6 +2856,7 @@ test = ["pep440", "pre-commit", "pytest", "testpath"]
 name = "nest-asyncio"
 version = "1.6.0"
 description = "Patch asyncio to allow nested event loops"
+category = "main"
 optional = false
 python-versions = ">=3.5"
 files = [
@@ -2774,6 +2868,7 @@ files = [
 name = "networkx"
 version = "3.3"
 description = "Python package for creating and manipulating graphs and networks"
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
@@ -2792,6 +2887,7 @@ test = ["pytest (>=7.2)", "pytest-cov (>=4.0)"]
 name = "nodeenv"
 version = "1.9.1"
 description = "Node.js virtual environment builder"
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,!=3.6.*,>=2.7"
 files = [
@@ -2803,6 +2899,7 @@ files = [
 name = "notebook"
 version = "7.2.2"
 description = "Jupyter Notebook - A web-based notebook environment for interactive computing"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -2826,6 +2923,7 @@ test = ["importlib-resources (>=5.0)", "ipykernel", "jupyter-server[test] (>=2.4
 name = "notebook-shim"
 version = "0.2.4"
 description = "A shim layer for notebook traits and config"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -2843,6 +2941,7 @@ test = ["pytest", "pytest-console-scripts", "pytest-jupyter", "pytest-tornasync"
 name = "numba"
 version = "0.60.0"
 description = "compiling Python code using LLVM"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -2870,13 +2969,14 @@ files = [
 ]
 
 [package.dependencies]
-llvmlite = "==0.43.*"
+llvmlite = ">=0.43.0dev0,<0.44"
 numpy = ">=1.22,<2.1"
 
 [[package]]
 name = "numcodecs"
 version = "0.13.0"
 description = "A Python package providing buffer compression and transformation codecs for use in data storage and communication applications."
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
@@ -2910,6 +3010,7 @@ zfpy = ["numpy (<2.0.0)", "zfpy (>=1.0.0)"]
 name = "numpy"
 version = "2.0.2"
 description = "Fundamental package for array computing in Python"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -2964,6 +3065,7 @@ files = [
 name = "numpydoc-decorator"
 version = "2.2.1"
 description = ""
+category = "main"
 optional = false
 python-versions = "<3.13,>=3.10"
 files = [
@@ -2978,6 +3080,7 @@ typing_extensions = "*"
 name = "oauthlib"
 version = "3.2.2"
 description = "A generic, spec-compliant, thorough implementation of the OAuth request-signing logic"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -2994,6 +3097,7 @@ signedtoken = ["cryptography (>=3.0.0)", "pyjwt (>=2.0.0,<3)"]
 name = "orjson"
 version = "3.10.7"
 description = "Fast, correct Python JSON library supporting dataclasses, datetimes, and numpy"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3060,6 +3164,7 @@ files = [
 name = "overrides"
 version = "7.7.0"
 description = "A decorator to automatically detect mismatch when overriding a method."
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -3071,6 +3176,7 @@ files = [
 name = "packaging"
 version = "24.1"
 description = "Core utilities for Python packages"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3082,6 +3188,7 @@ files = [
 name = "pandas"
 version = "2.2.2"
 description = "Powerful data structures for data analysis, time series, and statistics"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -3155,6 +3262,7 @@ xml = ["lxml (>=4.9.2)"]
 name = "pandocfilters"
 version = "1.5.1"
 description = "Utilities for writing pandoc filters in python"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*"
 files = [
@@ -3166,6 +3274,7 @@ files = [
 name = "parso"
 version = "0.8.4"
 description = "A Python Parser"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -3181,6 +3290,7 @@ testing = ["docopt", "pytest"]
 name = "partd"
 version = "1.4.2"
 description = "Appendable key-value storage"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -3199,6 +3309,7 @@ complete = ["blosc", "numpy (>=1.20.0)", "pandas (>=1.3)", "pyzmq"]
 name = "patsy"
 version = "0.5.6"
 description = "A Python package for describing statistical models and for building design matrices."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3217,6 +3328,7 @@ test = ["pytest", "pytest-cov", "scipy"]
 name = "pexpect"
 version = "4.9.0"
 description = "Pexpect allows easy control of interactive console applications."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3231,6 +3343,7 @@ ptyprocess = ">=0.5"
 name = "pillow"
 version = "10.4.0"
 description = "Python Imaging Library (Fork)"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3326,29 +3439,31 @@ xmp = ["defusedxml"]
 
 [[package]]
 name = "platformdirs"
-version = "4.2.2"
+version = "4.3.3"
 description = "A small Python package for determining appropriate platform-specific dirs, e.g. a `user data dir`."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "platformdirs-4.2.2-py3-none-any.whl", hash = "sha256:2d7a1657e36a80ea911db832a8a6ece5ee53d8de21edd5cc5879af6530b1bfee"},
-    {file = "platformdirs-4.2.2.tar.gz", hash = "sha256:38b7b51f512eed9e84a22788b4bce1de17c0adb134d6becb09836e37d8654cd3"},
+    {file = "platformdirs-4.3.3-py3-none-any.whl", hash = "sha256:50a5450e2e84f44539718293cbb1da0a0885c9d14adf21b77bae4e66fc99d9b5"},
+    {file = "platformdirs-4.3.3.tar.gz", hash = "sha256:d4e0b7d8ec176b341fb03cb11ca12d0276faa8c485f9cd218f613840463fc2c0"},
 ]
 
 [package.extras]
-docs = ["furo (>=2023.9.10)", "proselint (>=0.13)", "sphinx (>=7.2.6)", "sphinx-autodoc-typehints (>=1.25.2)"]
-test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=7.4.3)", "pytest-cov (>=4.1)", "pytest-mock (>=3.12)"]
-type = ["mypy (>=1.8)"]
+docs = ["furo (>=2024.8.6)", "proselint (>=0.14)", "sphinx (>=8.0.2)", "sphinx-autodoc-typehints (>=2.4)"]
+test = ["appdirs (==1.4.4)", "covdefaults (>=2.3)", "pytest (>=8.3.2)", "pytest-cov (>=5)", "pytest-mock (>=3.14)"]
+type = ["mypy (>=1.11.2)"]
 
 [[package]]
 name = "plotly"
-version = "5.24.0"
+version = "5.24.1"
 description = "An open-source, interactive data visualization library for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "plotly-5.24.0-py3-none-any.whl", hash = "sha256:0e54efe52c8cef899f7daa41be9ed97dfb6be622613a2a8f56a86a0634b2b67e"},
-    {file = "plotly-5.24.0.tar.gz", hash = "sha256:eae9f4f54448682442c92c1e97148e3ad0c52f0cf86306e1b76daba24add554a"},
+    {file = "plotly-5.24.1-py3-none-any.whl", hash = "sha256:f67073a1e637eb0dc3e46324d9d51e2fe76e9727c892dde64ddf1e1b51f29089"},
+    {file = "plotly-5.24.1.tar.gz", hash = "sha256:dbc8ac8339d248a4bcc36e08a5659bacfe1b079390b8953533f4eb22169b4bae"},
 ]
 
 [package.dependencies]
@@ -3359,6 +3474,7 @@ tenacity = ">=6.2.0"
 name = "pluggy"
 version = "1.5.0"
 description = "plugin and hook calling mechanisms for python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3374,6 +3490,7 @@ testing = ["pytest", "pytest-benchmark"]
 name = "pre-commit"
 version = "3.8.0"
 description = "A framework for managing and maintaining multi-language pre-commit hooks."
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -3392,6 +3509,7 @@ virtualenv = ">=20.10.0"
 name = "prometheus-client"
 version = "0.20.0"
 description = "Python client for the Prometheus monitoring system."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3406,6 +3524,7 @@ twisted = ["twisted"]
 name = "prompt-toolkit"
 version = "3.0.47"
 description = "Library for building powerful interactive command lines in Python"
+category = "main"
 optional = false
 python-versions = ">=3.7.0"
 files = [
@@ -3420,6 +3539,7 @@ wcwidth = "*"
 name = "proto-plus"
 version = "1.24.0"
 description = "Beautiful, Pythonic protocol buffers."
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3435,28 +3555,30 @@ testing = ["google-api-core (>=1.31.5)"]
 
 [[package]]
 name = "protobuf"
-version = "5.28.0"
+version = "5.28.1"
 description = ""
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "protobuf-5.28.0-cp310-abi3-win32.whl", hash = "sha256:66c3edeedb774a3508ae70d87b3a19786445fe9a068dd3585e0cefa8a77b83d0"},
-    {file = "protobuf-5.28.0-cp310-abi3-win_amd64.whl", hash = "sha256:6d7cc9e60f976cf3e873acb9a40fed04afb5d224608ed5c1a105db4a3f09c5b6"},
-    {file = "protobuf-5.28.0-cp38-abi3-macosx_10_9_universal2.whl", hash = "sha256:532627e8fdd825cf8767a2d2b94d77e874d5ddb0adefb04b237f7cc296748681"},
-    {file = "protobuf-5.28.0-cp38-abi3-manylinux2014_aarch64.whl", hash = "sha256:018db9056b9d75eb93d12a9d35120f97a84d9a919bcab11ed56ad2d399d6e8dd"},
-    {file = "protobuf-5.28.0-cp38-abi3-manylinux2014_x86_64.whl", hash = "sha256:6206afcb2d90181ae8722798dcb56dc76675ab67458ac24c0dd7d75d632ac9bd"},
-    {file = "protobuf-5.28.0-cp38-cp38-win32.whl", hash = "sha256:eef7a8a2f4318e2cb2dee8666d26e58eaf437c14788f3a2911d0c3da40405ae8"},
-    {file = "protobuf-5.28.0-cp38-cp38-win_amd64.whl", hash = "sha256:d001a73c8bc2bf5b5c1360d59dd7573744e163b3607fa92788b7f3d5fefbd9a5"},
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-    {file = "protobuf-5.28.0.tar.gz", hash = "sha256:dde74af0fa774fa98892209992295adbfb91da3fa98c8f67a88afe8f5a349add"},
+    {file = "protobuf-5.28.1-cp310-abi3-win32.whl", hash = "sha256:fc063acaf7a3d9ca13146fefb5b42ac94ab943ec6e978f543cd5637da2d57957"},
+    {file = "protobuf-5.28.1-cp310-abi3-win_amd64.whl", hash = "sha256:4c7f5cb38c640919791c9f74ea80c5b82314c69a8409ea36f2599617d03989af"},
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+    {file = "protobuf-5.28.1-cp38-abi3-manylinux2014_x86_64.whl", hash = "sha256:51f09caab818707ab91cf09cc5c156026599cf05a4520779ccbf53c1b352fb25"},
+    {file = "protobuf-5.28.1-cp38-cp38-win32.whl", hash = "sha256:1b04bde117a10ff9d906841a89ec326686c48ececeb65690f15b8cabe7149495"},
+    {file = "protobuf-5.28.1-cp38-cp38-win_amd64.whl", hash = "sha256:cabfe43044ee319ad6832b2fda332646f9ef1636b0130186a3ae0a52fc264bb4"},
+    {file = "protobuf-5.28.1-cp39-cp39-win32.whl", hash = "sha256:4b4b9a0562a35773ff47a3df823177ab71a1f5eb1ff56d8f842b7432ecfd7fd2"},
+    {file = "protobuf-5.28.1-cp39-cp39-win_amd64.whl", hash = "sha256:f24e5d70e6af8ee9672ff605d5503491635f63d5db2fffb6472be78ba62efd8f"},
+    {file = "protobuf-5.28.1-py3-none-any.whl", hash = "sha256:c529535e5c0effcf417682563719e5d8ac8d2b93de07a56108b4c2d436d7a29a"},
+    {file = "protobuf-5.28.1.tar.gz", hash = "sha256:42597e938f83bb7f3e4b35f03aa45208d49ae8d5bcb4bc10b9fc825e0ab5e423"},
 ]
 
 [[package]]
 name = "protopunica"
 version = "0.14.8.post2"
 description = "Protopunica is pomegranate frozen at version 0.14.8."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3494,6 +3616,7 @@ plotting = ["matplotlib", "pygraphviz"]
 name = "psutil"
 version = "6.0.0"
 description = "Cross-platform lib for process and system monitoring in Python."
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
 files = [
@@ -3523,6 +3646,7 @@ test = ["enum34", "ipaddress", "mock", "pywin32", "wmi"]
 name = "ptyprocess"
 version = "0.7.0"
 description = "Run a subprocess in a pseudo terminal"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3534,6 +3658,7 @@ files = [
 name = "pure-eval"
 version = "0.2.3"
 description = "Safely evaluate AST nodes without side effects"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3546,24 +3671,26 @@ tests = ["pytest"]
 
 [[package]]
 name = "pyasn1"
-version = "0.6.0"
+version = "0.6.1"
 description = "Pure-Python implementation of ASN.1 types and DER/BER/CER codecs (X.208)"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "pyasn1-0.6.0-py2.py3-none-any.whl", hash = "sha256:cca4bb0f2df5504f02f6f8a775b6e416ff9b0b3b16f7ee80b5a3153d9b804473"},
-    {file = "pyasn1-0.6.0.tar.gz", hash = "sha256:3a35ab2c4b5ef98e17dfdec8ab074046fbda76e281c5a706ccd82328cfc8f64c"},
+    {file = "pyasn1-0.6.1-py3-none-any.whl", hash = "sha256:0d632f46f2ba09143da3a8afe9e33fb6f92fa2320ab7e886e2d0f7672af84629"},
+    {file = "pyasn1-0.6.1.tar.gz", hash = "sha256:6f580d2bdd84365380830acf45550f2511469f673cb4a5ae3857a3170128b034"},
 ]
 
 [[package]]
 name = "pyasn1-modules"
-version = "0.4.0"
+version = "0.4.1"
 description = "A collection of ASN.1-based protocols modules"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "pyasn1_modules-0.4.0-py3-none-any.whl", hash = "sha256:be04f15b66c206eed667e0bb5ab27e2b1855ea54a842e5037738099e8ca4ae0b"},
-    {file = "pyasn1_modules-0.4.0.tar.gz", hash = "sha256:831dbcea1b177b28c9baddf4c6d1013c24c3accd14a1873fffaa6a2e905f17b6"},
+    {file = "pyasn1_modules-0.4.1-py3-none-any.whl", hash = "sha256:49bfa96b45a292b711e986f222502c1c9a5e1f4e568fc30e2574a6c7d07838fd"},
+    {file = "pyasn1_modules-0.4.1.tar.gz", hash = "sha256:c28e2dbf9c06ad61c71a075c7e0f9fd0f1b0bb2d2ad4377f240d33ac2ab60a7c"},
 ]
 
 [package.dependencies]
@@ -3573,6 +3700,7 @@ pyasn1 = ">=0.4.6,<0.7.0"
 name = "pycparser"
 version = "2.22"
 description = "C parser in Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3584,6 +3712,7 @@ files = [
 name = "pydata-sphinx-theme"
 version = "0.15.4"
 description = "Bootstrap-based Sphinx theme from the PyData community"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -3612,6 +3741,7 @@ test = ["pytest", "pytest-cov", "pytest-regressions", "sphinx[test]"]
 name = "pygments"
 version = "2.18.0"
 description = "Pygments is a syntax highlighting package written in Python."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3624,13 +3754,14 @@ windows-terminal = ["colorama (>=0.4.6)"]
 
 [[package]]
 name = "pytest"
-version = "8.3.2"
+version = "8.3.3"
 description = "pytest: simple powerful testing with Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "pytest-8.3.2-py3-none-any.whl", hash = "sha256:4ba08f9ae7dcf84ded419494d229b48d0903ea6407b030eaec46df5e6a73bba5"},
-    {file = "pytest-8.3.2.tar.gz", hash = "sha256:c132345d12ce551242c87269de812483f5bcc87cdbb4722e48487ba194f9fdce"},
+    {file = "pytest-8.3.3-py3-none-any.whl", hash = "sha256:a6853c7375b2663155079443d2e45de913a911a11d669df02a50814944db57b2"},
+    {file = "pytest-8.3.3.tar.gz", hash = "sha256:70b98107bd648308a7952b06e6ca9a50bc660be218d53c257cc1fc94fda10181"},
 ]
 
 [package.dependencies]
@@ -3648,6 +3779,7 @@ dev = ["argcomplete", "attrs (>=19.2)", "hypothesis (>=3.56)", "mock", "pygments
 name = "pytest-cases"
 version = "3.8.5"
 description = "Separate test code from test cases in pytest."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3664,6 +3796,7 @@ packaging = "*"
 name = "pytest-cov"
 version = "5.0.0"
 description = "Pytest plugin for measuring coverage."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3682,6 +3815,7 @@ testing = ["fields", "hunter", "process-tests", "pytest-xdist", "virtualenv"]
 name = "pytest-xdist"
 version = "3.6.1"
 description = "pytest xdist plugin for distributed testing, most importantly across multiple CPUs"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3702,6 +3836,7 @@ testing = ["filelock"]
 name = "python-dateutil"
 version = "2.9.0.post0"
 description = "Extensions to the standard Python datetime module"
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,>=2.7"
 files = [
@@ -3716,6 +3851,7 @@ six = ">=1.5"
 name = "python-json-logger"
 version = "2.0.7"
 description = "A python library adding a json log formatter"
+category = "main"
 optional = false
 python-versions = ">=3.6"
 files = [
@@ -3725,19 +3861,21 @@ files = [
 
 [[package]]
 name = "pytz"
-version = "2024.1"
+version = "2024.2"
 description = "World timezone definitions, modern and historical"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
-    {file = "pytz-2024.1-py2.py3-none-any.whl", hash = "sha256:328171f4e3623139da4983451950b28e95ac706e13f3f2630a879749e7a8b319"},
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+    {file = "pytz-2024.2-py2.py3-none-any.whl", hash = "sha256:31c7c1817eb7fae7ca4b8c7ee50c72f93aa2dd863de768e1ef4245d426aa0725"},
+    {file = "pytz-2024.2.tar.gz", hash = "sha256:2aa355083c50a0f93fa581709deac0c9ad65cca8a9e9beac660adcbd493c798a"},
 ]
 
 [[package]]
 name = "pywin32"
 version = "306"
 description = "Python for Window Extensions"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -3761,6 +3899,7 @@ files = [
 name = "pywinpty"
 version = "2.0.13"
 description = "Pseudo terminal support for Windows from Python."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3776,6 +3915,7 @@ files = [
 name = "pyyaml"
 version = "6.0.2"
 description = "YAML parser and emitter for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3838,6 +3978,7 @@ files = [
 name = "pyzmq"
 version = "26.2.0"
 description = "Python bindings for 0MQ"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -3959,6 +4100,7 @@ cffi = {version = "*", markers = "implementation_name == \"pypy\""}
 name = "referencing"
 version = "0.35.1"
 description = "JSON Referencing + Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3974,6 +4116,7 @@ rpds-py = ">=0.7.0"
 name = "requests"
 version = "2.32.3"
 description = "Python HTTP for Humans."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -3995,6 +4138,7 @@ use-chardet-on-py3 = ["chardet (>=3.0.2,<6)"]
 name = "requests-oauthlib"
 version = "2.0.0"
 description = "OAuthlib authentication support for Requests."
+category = "main"
 optional = false
 python-versions = ">=3.4"
 files = [
@@ -4013,6 +4157,7 @@ rsa = ["oauthlib[signedtoken] (>=3.0.0)"]
 name = "retrying"
 version = "1.3.4"
 description = "Retrying"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -4027,6 +4172,7 @@ six = ">=1.7.0"
 name = "rfc3339-validator"
 version = "0.1.4"
 description = "A pure python RFC3339 validator"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -4041,6 +4187,7 @@ six = "*"
 name = "rfc3986-validator"
 version = "0.1.1"
 description = "Pure python rfc3986 validator"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*"
 files = [
@@ -4052,6 +4199,7 @@ files = [
 name = "rpds-py"
 version = "0.20.0"
 description = "Python bindings to Rust's persistent data structures (rpds)"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4164,6 +4312,7 @@ files = [
 name = "rsa"
 version = "4.9"
 description = "Pure-Python RSA implementation"
+category = "main"
 optional = false
 python-versions = ">=3.6,<4"
 files = [
@@ -4176,40 +4325,57 @@ pyasn1 = ">=0.1.3"
 
 [[package]]
 name = "ruff"
-version = "0.6.3"
+version = "0.6.5"
 description = "An extremely fast Python linter and code formatter, written in Rust."
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
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 ]
 
 [[package]]
 name = "scikit-allel"
-version = "1.3.11"
+version = "1.3.12"
 description = "A Python package for exploring and analysing genetic variation data."
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
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+    {file = "scikit_allel-1.3.12.tar.gz", hash = "sha256:40ea73a69ecc6c78153a8ea336e210c2ed8692f816e3665ce46b1bf38f133176"},
 ]
 
 [package.dependencies]
@@ -4223,6 +4389,7 @@ full = ["h5py", "hmmlearn", "matplotlib", "nose", "numexpr", "pandas", "protopun
 name = "scipy"
 version = "1.14.1"
 description = "Fundamental algorithms for scientific computing in Python"
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
@@ -4273,6 +4440,7 @@ test = ["Cython", "array-api-strict (>=2.0)", "asv", "gmpy2", "hypothesis (>=6.3
 name = "send2trash"
 version = "1.8.3"
 description = "Send file to trash natively under Mac OS X, Windows and Linux"
+category = "main"
 optional = false
 python-versions = "!=3.0.*,!=3.1.*,!=3.2.*,!=3.3.*,!=3.4.*,!=3.5.*,>=2.7"
 files = [
@@ -4287,28 +4455,30 @@ win32 = ["pywin32"]
 
 [[package]]
 name = "setuptools"
-version = "74.0.0"
+version = "75.1.0"
 description = "Easily download, build, install, upgrade, and uninstall Python packages"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
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 ]
 
 [package.extras]
 check = ["pytest-checkdocs (>=2.4)", "pytest-ruff (>=0.2.1)", "ruff (>=0.5.2)"]
-core = ["importlib-metadata (>=6)", "importlib-resources (>=5.10.2)", "jaraco.text (>=3.7)", "more-itertools (>=8.8)", "packaging (>=24)", "platformdirs (>=2.6.2)", "tomli (>=2.0.1)", "wheel (>=0.43.0)"]
+core = ["importlib-metadata (>=6)", "importlib-resources (>=5.10.2)", "jaraco.collections", "jaraco.functools", "jaraco.text (>=3.7)", "more-itertools", "more-itertools (>=8.8)", "packaging", "packaging (>=24)", "platformdirs (>=2.6.2)", "tomli (>=2.0.1)", "wheel (>=0.43.0)"]
 cover = ["pytest-cov"]
 doc = ["furo", "jaraco.packaging (>=9.3)", "jaraco.tidelift (>=1.4)", "pygments-github-lexers (==0.0.5)", "pyproject-hooks (!=1.1)", "rst.linker (>=1.9)", "sphinx (>=3.5)", "sphinx-favicon", "sphinx-inline-tabs", "sphinx-lint", "sphinx-notfound-page (>=1,<2)", "sphinx-reredirects", "sphinxcontrib-towncrier", "towncrier (<24.7)"]
 enabler = ["pytest-enabler (>=2.2)"]
 test = ["build[virtualenv] (>=1.0.3)", "filelock (>=3.4.0)", "ini2toml[lite] (>=0.14)", "jaraco.develop (>=7.21)", "jaraco.envs (>=2.2)", "jaraco.path (>=3.2.0)", "jaraco.test", "packaging (>=23.2)", "pip (>=19.1)", "pyproject-hooks (!=1.1)", "pytest (>=6,!=8.1.*)", "pytest-home (>=0.5)", "pytest-perf", "pytest-subprocess", "pytest-timeout", "pytest-xdist (>=3)", "tomli-w (>=1.0.0)", "virtualenv (>=13.0.0)", "wheel (>=0.44.0)"]
-type = ["importlib-metadata (>=7.0.2)", "jaraco.develop (>=7.21)", "mypy (==1.11.*)", "pytest-mypy"]
+type = ["importlib-metadata (>=7.0.2)", "jaraco.develop (>=7.21)", "mypy (>=1.11.0,<1.12.0)", "pytest-mypy"]
 
 [[package]]
 name = "six"
 version = "1.16.0"
 description = "Python 2 and 3 compatibility utilities"
+category = "main"
 optional = false
 python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*"
 files = [
@@ -4320,6 +4490,7 @@ files = [
 name = "snakeviz"
 version = "2.2.0"
 description = "A web-based viewer for Python profiler output"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -4334,6 +4505,7 @@ tornado = ">=2.0"
 name = "sniffio"
 version = "1.3.1"
 description = "Sniff out which async library your code is running under"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -4345,6 +4517,7 @@ files = [
 name = "snowballstemmer"
 version = "2.2.0"
 description = "This package provides 29 stemmers for 28 languages generated from Snowball algorithms."
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -4356,6 +4529,7 @@ files = [
 name = "soupsieve"
 version = "2.6"
 description = "A modern CSS selector implementation for Beautiful Soup."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4367,6 +4541,7 @@ files = [
 name = "sphinx"
 version = "8.0.2"
 description = "Python documentation generator"
+category = "main"
 optional = false
 python-versions = ">=3.10"
 files = [
@@ -4402,6 +4577,7 @@ test = ["cython (>=3.0)", "defusedxml (>=0.7.1)", "pytest (>=8.0)", "setuptools
 name = "sphinx-design"
 version = "0.6.1"
 description = "A sphinx extension for designing beautiful, view size responsive web components."
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -4427,6 +4603,7 @@ theme-sbt = ["sphinx-book-theme (>=1.1,<2.0)"]
 name = "sphinxcontrib-applehelp"
 version = "2.0.0"
 description = "sphinxcontrib-applehelp is a Sphinx extension which outputs Apple help books"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -4443,6 +4620,7 @@ test = ["pytest"]
 name = "sphinxcontrib-devhelp"
 version = "2.0.0"
 description = "sphinxcontrib-devhelp is a sphinx extension which outputs Devhelp documents"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -4459,6 +4637,7 @@ test = ["pytest"]
 name = "sphinxcontrib-htmlhelp"
 version = "2.1.0"
 description = "sphinxcontrib-htmlhelp is a sphinx extension which renders HTML help files"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -4475,6 +4654,7 @@ test = ["html5lib", "pytest"]
 name = "sphinxcontrib-jsmath"
 version = "1.0.1"
 description = "A sphinx extension which renders display math in HTML via JavaScript"
+category = "main"
 optional = false
 python-versions = ">=3.5"
 files = [
@@ -4489,6 +4669,7 @@ test = ["flake8", "mypy", "pytest"]
 name = "sphinxcontrib-qthelp"
 version = "2.0.0"
 description = "sphinxcontrib-qthelp is a sphinx extension which outputs QtHelp documents"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -4505,6 +4686,7 @@ test = ["defusedxml (>=0.7.1)", "pytest"]
 name = "sphinxcontrib-serializinghtml"
 version = "2.0.0"
 description = "sphinxcontrib-serializinghtml is a sphinx extension which outputs \"serialized\" HTML files (json and pickle)"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
@@ -4521,6 +4703,7 @@ test = ["pytest"]
 name = "stack-data"
 version = "0.6.3"
 description = "Extract data from python stack frames and tracebacks for informative displays"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -4538,53 +4721,55 @@ tests = ["cython", "littleutils", "pygments", "pytest", "typeguard"]
 
 [[package]]
 name = "statsmodels"
-version = "0.14.2"
+version = "0.14.3"
 description = "Statistical computations and models for Python"
+category = "main"
 optional = false
 python-versions = ">=3.9"
 files = [
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 ]
 
 [package.dependencies]
-numpy = ">=1.22.3"
+numpy = ">=1.22.3,<3"
 packaging = ">=21.3"
 pandas = ">=1.4,<2.1.0 || >2.1.0"
 patsy = ">=0.5.6"
 scipy = ">=1.8,<1.9.2 || >1.9.2"
 
 [package.extras]
-build = ["cython (>=0.29.33)"]
-develop = ["colorama", "cython (>=0.29.33)", "cython (>=3.0.10,<4)", "flake8", "isort", "joblib", "matplotlib (>=3)", "pytest (>=7.3.0,<8)", "pytest-cov", "pytest-randomly", "pytest-xdist", "pywinpty", "setuptools-scm[toml] (>=8.0,<9.0)"]
+build = ["cython (>=3.0.10)"]
+develop = ["colorama", "cython (>=3.0.10)", "cython (>=3.0.10,<4)", "flake8", "isort", "joblib", "matplotlib (>=3)", "pytest (>=7.3.0,<8)", "pytest-cov", "pytest-randomly", "pytest-xdist", "pywinpty", "setuptools-scm[toml] (>=8.0,<9.0)"]
 docs = ["ipykernel", "jupyter-client", "matplotlib", "nbconvert", "nbformat", "numpydoc", "pandas-datareader", "sphinx"]
 
 [[package]]
 name = "tenacity"
 version = "9.0.0"
 description = "Retry code until it succeeds"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4600,6 +4785,7 @@ test = ["pytest", "tornado (>=4.5)", "typeguard"]
 name = "termcolor"
 version = "2.3.0"
 description = "ANSI color formatting for output in terminal"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -4614,6 +4800,7 @@ tests = ["pytest", "pytest-cov"]
 name = "terminado"
 version = "0.18.1"
 description = "Tornado websocket backend for the Xterm.js Javascript terminal emulator library."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4635,6 +4822,7 @@ typing = ["mypy (>=1.6,<2.0)", "traitlets (>=5.11.1)"]
 name = "tinycss2"
 version = "1.3.0"
 description = "A tiny CSS parser"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4653,6 +4841,7 @@ test = ["pytest", "ruff"]
 name = "tomli"
 version = "2.0.1"
 description = "A lil' TOML parser"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -4664,6 +4853,7 @@ files = [
 name = "toolz"
 version = "0.12.1"
 description = "List processing tools and functional utilities"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -4675,6 +4865,7 @@ files = [
 name = "tornado"
 version = "6.4.1"
 description = "Tornado is a Python web framework and asynchronous networking library, originally developed at FriendFeed."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4695,6 +4886,7 @@ files = [
 name = "tqdm"
 version = "4.66.5"
 description = "Fast, Extensible Progress Meter"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -4715,6 +4907,7 @@ telegram = ["requests"]
 name = "traitlets"
 version = "5.14.3"
 description = "Traitlets Python configuration system"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4730,6 +4923,7 @@ test = ["argcomplete (>=3.0.3)", "mypy (>=1.7.0)", "pre-commit", "pytest (>=7.0,
 name = "traittypes"
 version = "0.2.1"
 description = "Scipy trait types"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -4747,6 +4941,7 @@ test = ["numpy", "pandas", "pytest", "xarray"]
 name = "typeguard"
 version = "4.3.0"
 description = "Run-time type checker for Python"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4763,19 +4958,21 @@ test = ["coverage[toml] (>=7)", "mypy (>=1.2.0)", "pytest (>=7)"]
 
 [[package]]
 name = "types-python-dateutil"
-version = "2.9.0.20240821"
+version = "2.9.0.20240906"
 description = "Typing stubs for python-dateutil"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
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 [[package]]
 name = "typing-extensions"
 version = "4.12.2"
 description = "Backported and Experimental Type Hints for Python 3.8+"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4787,6 +4984,7 @@ files = [
 name = "tzdata"
 version = "2024.1"
 description = "Provider of IANA time zone data"
+category = "main"
 optional = false
 python-versions = ">=2"
 files = [
@@ -4798,6 +4996,7 @@ files = [
 name = "uri-template"
 version = "1.3.0"
 description = "RFC 6570 URI Template Processor"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -4810,13 +5009,14 @@ dev = ["flake8", "flake8-annotations", "flake8-bandit", "flake8-bugbear", "flake
 
 [[package]]
 name = "urllib3"
-version = "2.2.2"
+version = "2.2.3"
 description = "HTTP library with thread-safe connection pooling, file post, and more."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
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 [package.extras]
@@ -4827,13 +5027,14 @@ zstd = ["zstandard (>=0.18.0)"]
 
 [[package]]
 name = "virtualenv"
-version = "20.26.3"
+version = "20.26.4"
 description = "Virtual Python Environment builder"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
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 [package.dependencies]
@@ -4849,6 +5050,7 @@ test = ["covdefaults (>=2.3)", "coverage (>=7.2.7)", "coverage-enable-subprocess
 name = "wcwidth"
 version = "0.2.13"
 description = "Measures the displayed width of unicode strings in a terminal"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -4860,6 +5062,7 @@ files = [
 name = "webcolors"
 version = "24.8.0"
 description = "A library for working with the color formats defined by HTML and CSS."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4875,6 +5078,7 @@ tests = ["coverage[toml]"]
 name = "webencodings"
 version = "0.5.1"
 description = "Character encoding aliases for legacy web content"
+category = "main"
 optional = false
 python-versions = "*"
 files = [
@@ -4886,6 +5090,7 @@ files = [
 name = "websocket-client"
 version = "1.8.0"
 description = "WebSocket client for Python with low level API options"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4902,6 +5107,7 @@ test = ["websockets"]
 name = "werkzeug"
 version = "3.0.4"
 description = "The comprehensive WSGI web application library."
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
@@ -4919,6 +5125,7 @@ watchdog = ["watchdog (>=2.3)"]
 name = "widgetsnbextension"
 version = "4.0.13"
 description = "Jupyter interactive widgets for Jupyter Notebook"
+category = "main"
 optional = false
 python-versions = ">=3.7"
 files = [
@@ -4928,19 +5135,20 @@ files = [
 
 [[package]]
 name = "xarray"
-version = "2024.7.0"
+version = "2024.9.0"
 description = "N-D labeled arrays and datasets in Python"
+category = "main"
 optional = false
-python-versions = ">=3.9"
+python-versions = ">=3.10"
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 ]
 
 [package.dependencies]
-numpy = ">=1.23"
+numpy = ">=1.24"
 packaging = ">=23.1"
-pandas = ">=2.0"
+pandas = ">=2.1"
 
 [package.extras]
 accel = ["bottleneck", "flox", "numbagg", "opt-einsum", "scipy"]
@@ -4952,112 +5160,116 @@ viz = ["matplotlib", "nc-time-axis", "seaborn"]
 
 [[package]]
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-version = "2024.6.0"
+version = "2024.9.0"
 description = "Source of XYZ tiles providers"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
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+    {file = "yarl-1.11.1-cp39-cp39-win32.whl", hash = "sha256:14438dfc5015661f75f85bc5adad0743678eefee266ff0c9a8e32969d5d69f74"},
+    {file = "yarl-1.11.1-cp39-cp39-win_amd64.whl", hash = "sha256:94d0caaa912bfcdc702a4204cd5e2bb01eb917fc4f5ea2315aa23962549561b0"},
+    {file = "yarl-1.11.1-py3-none-any.whl", hash = "sha256:72bf26f66456baa0584eff63e44545c9f0eaed9b73cb6601b647c91f14c11f38"},
+    {file = "yarl-1.11.1.tar.gz", hash = "sha256:1bb2d9e212fb7449b8fb73bc461b51eaa17cc8430b4a87d87be7b25052d92f53"},
 ]
 
 [package.dependencies]
@@ -5068,6 +5280,7 @@ multidict = ">=4.0"
 name = "yaspin"
 version = "3.0.2"
 description = "Yet Another Terminal Spinner"
+category = "main"
 optional = false
 python-versions = "<4.0,>=3.9"
 files = [
@@ -5080,20 +5293,21 @@ termcolor = "2.3.0"
 
 [[package]]
 name = "zarr"
-version = "2.18.2"
+version = "2.18.3"
 description = "An implementation of chunked, compressed, N-dimensional arrays for Python"
+category = "main"
 optional = false
-python-versions = ">=3.9"
+python-versions = ">=3.10"
 files = [
-    {file = "zarr-2.18.2-py3-none-any.whl", hash = "sha256:a638754902f97efa99b406083fdc807a0e2ccf12a949117389d2a4ba9b05df38"},
-    {file = "zarr-2.18.2.tar.gz", hash = "sha256:9bb393b8a0a38fb121dbb913b047d75db28de9890f6d644a217a73cf4ae74f47"},
+    {file = "zarr-2.18.3-py3-none-any.whl", hash = "sha256:b1f7dfd2496f436745cdd4c7bcf8d3b4bc1dceef5fdd0d589c87130d842496dd"},
+    {file = "zarr-2.18.3.tar.gz", hash = "sha256:2580d8cb6dd84621771a10d31c4d777dca8a27706a1a89b29f42d2d37e2df5ce"},
 ]
 
 [package.dependencies]
 asciitree = "*"
 fasteners = {version = "*", markers = "sys_platform != \"emscripten\""}
 numcodecs = ">=0.10.0"
-numpy = ">=1.23"
+numpy = ">=1.24"
 
 [package.extras]
 docs = ["numcodecs[msgpack]", "numpydoc", "pydata-sphinx-theme", "sphinx", "sphinx-automodapi", "sphinx-copybutton", "sphinx-design", "sphinx-issues"]
@@ -5101,13 +5315,14 @@ jupyter = ["ipytree (>=0.2.2)", "ipywidgets (>=8.0.0)", "notebook"]
 
 [[package]]
 name = "zipp"
-version = "3.20.1"
+version = "3.20.2"
 description = "Backport of pathlib-compatible object wrapper for zip files"
+category = "main"
 optional = false
 python-versions = ">=3.8"
 files = [
-    {file = "zipp-3.20.1-py3-none-any.whl", hash = "sha256:9960cd8967c8f85a56f920d5d507274e74f9ff813a0ab8889a5b5be2daf44064"},
-    {file = "zipp-3.20.1.tar.gz", hash = "sha256:c22b14cc4763c5a5b04134207736c107db42e9d3ef2d9779d465f5f1bcba572b"},
+    {file = "zipp-3.20.2-py3-none-any.whl", hash = "sha256:a817ac80d6cf4b23bf7f2828b7cabf326f15a001bea8b1f9b49631780ba28350"},
+    {file = "zipp-3.20.2.tar.gz", hash = "sha256:bc9eb26f4506fda01b81bcde0ca78103b6e62f991b381fec825435c836edbc29"},
 ]
 
 [package.extras]
@@ -5124,4 +5339,4 @@ dev = ["jupyterlab", "memory-profiler", "mypy", "notebook", "pre-commit", "pydat
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.10,<3.13"
-content-hash = "1748915e3b09b5363b5f86b4e10229e6565136963d2205bd25aa57b9bd74d42c"
+content-hash = "4cadf38a5632b674d2b2b9725f93a83f9f9ccb7e0d4a43e692e3a2bd02b83c5a"
diff --git a/pyproject.toml b/pyproject.toml
index 5ed713cb..80c7878f 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -17,30 +17,22 @@ authors = [
 license = "MIT"
 
 [tool.poetry.dependencies]
-# ensure compatibility with numba
 python = ">=3.10,<3.13"
-# ensure compatibility with modules compiled with numpy v1.x
 numpy = "*"
-# ensure compatibility with modules compiled with numpy v1.x
-numba = "*"
-# force llvmlite above broken version
+numba = ">=0.60.0"
 llvmlite = "*"
 scipy = "*"
 pandas = "*"
 zarr = "*"
-# ensure compatibility with modules compiled with numpy v1.x
 dask = {version="*", extras=["array"]}
 fsspec = "*"
 gcsfs = "*"
 google-auth = "*"
 BioPython = "*"
-scikit-allel = "1.3.11"
+scikit-allel = ">=1.3.12"
 xarray = "*"
 plotly = "*"
-# https://github.com/bokeh/bokeh/issues/12614
-# bokeh 3.0 has a problem with stretch sizing modes
-bokeh = ">=3.1.0"
-# ensure compatibility with modules compiled with numpy v1.x
+bokeh = "*"
 statsmodels = "*"
 ipyleaflet = ">=0.17.0"
 ipywidgets = "*"
@@ -60,7 +52,7 @@ dash-cytoscape = ">=1.0.0"
 numpydoc_decorator = ">=2.1.0"
 typing_extensions = "*"
 typeguard = ">=4.0.0"
-protopunica = "0.14.8.post2"
+protopunica = ">=0.14.8.post2"
 # accelerate plotly - https://plotly.com/python/renderers/#performance
 orjson = "*"
 # providers spinners