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poetry.lock
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# This file is automatically @generated by Poetry 1.8.2 and should not be changed by hand.
[[package]]
name = "asttokens"
version = "2.4.1"
description = "Annotate AST trees with source code positions"
optional = false
python-versions = "*"
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six = ">=1.12.0"
[package.extras]
astroid = ["astroid (>=1,<2)", "astroid (>=2,<4)"]
test = ["astroid (>=1,<2)", "astroid (>=2,<4)", "pytest"]
[[package]]
name = "biopython"
version = "1.79"
description = "Freely available tools for computational molecular biology."
optional = false
python-versions = ">=3.6"
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numpy = "*"
[[package]]
name = "build"
version = "1.2.1"
description = "A simple, correct Python build frontend"
optional = false
python-versions = ">=3.8"
files = [
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colorama = {version = "*", markers = "os_name == \"nt\""}
importlib-metadata = {version = ">=4.6", markers = "python_full_version < \"3.10.2\""}
packaging = ">=19.1"
pyproject_hooks = "*"
tomli = {version = ">=1.1.0", markers = "python_version < \"3.11\""}
[package.extras]
docs = ["furo (>=2023.08.17)", "sphinx (>=7.0,<8.0)", "sphinx-argparse-cli (>=1.5)", "sphinx-autodoc-typehints (>=1.10)", "sphinx-issues (>=3.0.0)"]
test = ["build[uv,virtualenv]", "filelock (>=3)", "pytest (>=6.2.4)", "pytest-cov (>=2.12)", "pytest-mock (>=2)", "pytest-rerunfailures (>=9.1)", "pytest-xdist (>=1.34)", "setuptools (>=42.0.0)", "setuptools (>=56.0.0)", "setuptools (>=56.0.0)", "setuptools (>=67.8.0)", "wheel (>=0.36.0)"]
typing = ["build[uv]", "importlib-metadata (>=5.1)", "mypy (>=1.9.0,<1.10.0)", "tomli", "typing-extensions (>=3.7.4.3)"]
uv = ["uv (>=0.1.18)"]
virtualenv = ["virtualenv (>=20.0.35)"]
[[package]]
name = "cachecontrol"
version = "0.14.0"
description = "httplib2 caching for requests"
optional = false
python-versions = ">=3.7"
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filelock = {version = ">=3.8.0", optional = true, markers = "extra == \"filecache\""}
msgpack = ">=0.5.2,<2.0.0"
requests = ">=2.16.0"
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dev = ["CacheControl[filecache,redis]", "black", "build", "cherrypy", "furo", "mypy", "pytest", "pytest-cov", "sphinx", "sphinx-copybutton", "tox", "types-redis", "types-requests"]
filecache = ["filelock (>=3.8.0)"]
redis = ["redis (>=2.10.5)"]
[[package]]
name = "certifi"
version = "2024.2.2"
description = "Python package for providing Mozilla's CA Bundle."
optional = false
python-versions = ">=3.6"
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name = "cffi"
version = "1.16.0"
description = "Foreign Function Interface for Python calling C code."
optional = false
python-versions = ">=3.8"
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