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[NTR] Lamina propria fibroblast #2589

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JABelfiore opened this issue Sep 20, 2024 · 1 comment
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[NTR] Lamina propria fibroblast #2589

JABelfiore opened this issue Sep 20, 2024 · 1 comment
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cellxgene GutCellAtlas HCA/DCP Needed/useful for the Human Cell Atlas new term request

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@JABelfiore
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Please check that the term does not already exist by using the ontology search tool OLS:
https://www.ebi.ac.uk/ols4/ontologies/cl

Preferred term label
Lamina propria fibroblast (S1)

Synonyms (add reference(s), please)
S1 fibroblast [PMID:30270042]

Definition (free text, with reference(s), please. PubMed ID format is PMID:XXXXXX)
A fibroblast located in the lamina propria of the intestinal mucosa, particularly in the small intestine. This cell expresses PDGFRα and CD81 and is negative for α-smooth muscle actin (α-SMA). This cell is positioned adjacent to myofibroblasts surrounding colonic crypts. It is capable of synthesizing extracellular matrix components and structural proteins such as collagen and elastin[PMID:36639348][PMID:36251739].

Parent cell type term (check the hierarchy here https://www.ebi.ac.uk/ols4/ontologies/cl)

Fibroblast

Anatomical structure where the cell type is found (check Uberon for anatomical structures: https://www.ebi.ac.uk/ols4/ontologies/uberon)

Lamina propria of intestinal mucosa

Your ORCID
https://orcid.org/0009-0005-7919-4905

@JABelfiore JABelfiore added new term request HCA/DCP Needed/useful for the Human Cell Atlas cellxgene GutCellAtlas labels Sep 20, 2024
@JABelfiore JABelfiore added this to the pre HCA meeting release milestone Sep 20, 2024
@JABelfiore JABelfiore self-assigned this Sep 20, 2024
@JABelfiore
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duplicate

@JABelfiore JABelfiore closed this as not planned Won't fix, can't repro, duplicate, stale Sep 20, 2024
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cellxgene GutCellAtlas HCA/DCP Needed/useful for the Human Cell Atlas new term request
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