diff --git a/src/ontology/cl-edit.owl b/src/ontology/cl-edit.owl index 7bf70824a..940f978ce 100644 --- a/src/ontology/cl-edit.owl +++ b/src/ontology/cl-edit.owl @@ -3066,6 +3066,8 @@ Declaration(Class(obo:CL_4047006)) Declaration(Class(obo:CL_4047007)) Declaration(Class(obo:CL_4047011)) Declaration(Class(obo:CL_4047012)) +Declaration(Class(obo:CL_4047051)) +Declaration(Class(obo:CL_4047052)) Declaration(Class(obo:CL_4052001)) Declaration(Class(obo:CL_4052002)) Declaration(Class(obo:CP_0000000)) @@ -25557,13 +25559,14 @@ AnnotationAssertion(oboInOwl:hasNarrowSynonym obo:CL_1000346 "vacuolar absorptiv AnnotationAssertion(rdfs:label obo:CL_1000346 "enterocyte of epithelium proper of large intestine") SubClassOf(obo:CL_1000346 obo:CL_0002071) -# Class: obo:CL_1000347 (enterocyte of colon) +# Class: obo:CL_1000347 (colonocyte) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "GOC:tfm") obo:IAO_0000115 obo:CL_1000347 "A columnar cell of the colon that is part of the colonic epithelium.") AnnotationAssertion(oboInOwl:hasDbXref obo:CL_1000347 "FMA:263114") AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:34497389") oboInOwl:hasExactSynonym obo:CL_1000347 "colonocyte") +AnnotationAssertion(oboInOwl:hasExactSynonym obo:CL_1000347 "enterocyte of colon") AnnotationAssertion(oboInOwl:hasNarrowSynonym obo:CL_1000347 "vacuolar absorptive cell of epithelium of colon") -AnnotationAssertion(rdfs:label obo:CL_1000347 "enterocyte of colon") +AnnotationAssertion(rdfs:label obo:CL_1000347 "colonocyte") EquivalentClasses(obo:CL_1000347 ObjectIntersectionOf(obo:CL_0002071 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0000397))) SubClassOf(Annotation(oboInOwl:is_inferred "true") obo:CL_1000347 obo:CL_0002071) @@ -30867,14 +30870,13 @@ AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:16230044") rdfs:comment AnnotationAssertion(rdfs:label obo:CL_4030025 "renal cortical fibroblast") EquivalentClasses(obo:CL_4030025 ObjectIntersectionOf(obo:CL_0000057 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0005270))) -# Class: obo:CL_4030026 (BEST4+ intestinal epithelial cell, human) +# Class: obo:CL_4030026 (BEST4+ enteroycte) -AnnotationAssertion(Annotation(oboInOwl:hasDbXref ) Annotation(oboInOwl:hasDbXref "PMID:24223998") Annotation(oboInOwl:hasDbXref "PMID:35176508") obo:IAO_0000115 obo:CL_4030026 "An absorptive epithelial cell of the human intestine expressing bestrophin-4 (BEST4) calcium-activated ion channels.") +AnnotationAssertion(Annotation(oboInOwl:hasDbXref ) Annotation(oboInOwl:hasDbXref "PMID:24223998") Annotation(oboInOwl:hasDbXref "PMID:35176508") obo:IAO_0000115 obo:CL_4030026 "An enterocyte of the human intestine expressing bestrophin-4 (BEST4) calcium-activated ion channels.") AnnotationAssertion(terms:date obo:CL_4030026 "2022-09-07T12:34:20Z"^^xsd:dateTime) -AnnotationAssertion(rdfs:label obo:CL_4030026 "BEST4+ intestinal epithelial cell, human") -SubClassOf(obo:CL_4030026 obo:CL_0000677) +AnnotationAssertion(rdfs:label obo:CL_4030026 "BEST4+ enteroycte") +EquivalentClasses(obo:CL_4030026 ObjectIntersectionOf(obo:CL_0000584 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_Q8NFU0))) SubClassOf(obo:CL_4030026 ObjectSomeValuesFrom(obo:RO_0002162 obo:NCBITaxon_9606)) -SubClassOf(obo:CL_4030026 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_Q8NFU0)) # Class: obo:CL_4030027 (GABAergic amacrine cell) @@ -32378,6 +32380,22 @@ AnnotationAssertion(terms:date obo:CL_4047012 "2024-09-06T08:41:39Z"^^xsd:dateTi AnnotationAssertion(rdfs:label obo:CL_4047012 "angiogenic pericyte"@en) SubClassOf(obo:CL_4047012 obo:CL_0000669) +# Class: obo:CL_4047051 (small intestine BEST4+ enterocyte) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:24223998") Annotation(oboInOwl:hasDbXref "PMID:34497389") obo:IAO_0000115 obo:CL_4047051 "An enterocyte of the human small intestine expressing bestrophin-4 (BEST4) calcium-activated ion channels. These enterocytes have a disinctive transcriptomic profile and are scattered through the small intestine epithelium.") +AnnotationAssertion(terms:contributor obo:CL_4047051 ) +AnnotationAssertion(terms:date obo:CL_4047051 "2024-07-25T13:05:50Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:label obo:CL_4047051 "small intestine BEST4+ enterocyte") +EquivalentClasses(obo:CL_4047051 ObjectIntersectionOf(obo:CL_0000584 ObjectSomeValuesFrom(obo:BFO_0000050 obo:UBERON_0001902) ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_Q8NFU0))) + +# Class: obo:CL_4047052 (BEST4+ colonocyte) + +AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:24223998") Annotation(oboInOwl:hasDbXref "PMID:34497389") obo:IAO_0000115 obo:CL_4047052 "An enterocyte of the human colon expressing bestrophin-4 (BEST4) calcium-activated ion channels. These cells have a distinct transcriptomic profile compared to other enterocytes and are scattered through the colon epithelium.") +AnnotationAssertion(terms:contributor obo:CL_4047052 ) +AnnotationAssertion(terms:date obo:CL_4047052 "2024-07-25T13:21:19Z"^^xsd:dateTime) +AnnotationAssertion(rdfs:label obo:CL_4047052 "BEST4+ colonocyte") +EquivalentClasses(obo:CL_4047052 ObjectIntersectionOf(obo:CL_1000347 ObjectSomeValuesFrom(obo:RO_0002292 obo:PR_Q8NFU0))) + # Class: obo:CL_4052001 (multiciliated ependymal cell) AnnotationAssertion(Annotation(oboInOwl:hasDbXref "PMID:25045600") Annotation(oboInOwl:hasDbXref "PMID:28067220") Annotation(oboInOwl:hasDbXref "PMID:37008045") obo:IAO_0000115 obo:CL_4052001 "An ependymal cell that lines the lateral, third, and fourth ventricles of the brain. The cell is characterized by multiple motile cilia on its apical surface, which beats in a coordinated manner to facilitate the movement of cerebrospinal fluid (CSF), contributing to brain homeostasis.")