V1.2.2 Release of SeqSender
Changes:
GISAID:
- FLU GISAID submission metadata now correctly parses partial collection dates. If only year is present, it is now correctly stored in "Collection_Year" and if/when month is also present, it is stored in "Collection_Month". If the entire "YYYY-MM-DD" collection date is present, it is stored in the "Collection_Date" field and "Collection_Year"/"Collection_Month" are left empty, otherwise, if the entire collection date is not present, "Collection_Date" is left empty. All fields are added regardless of whether there are only partial/complete dates present.
- FLU template/validation metadata has additional fields added.
- Sampling_Strategy
- Sequencing_Strategy
- Sequencing_Technology
- Assembly_Method
- Coverage
- Adamantanes_Resistance_pheno
- Oseltamivir_Resistance_pheno
- Zanamivir_Resistance_pheno
- Peramivir_Resistance_pheno
- Other_Resistance_pheno
What's Changed
- Merge pull request #72 from CDCgov/dev by @dthoward96 in #76
- v1.2.1 documentation typos fixes by @dthoward96 in #77
- Update issue templates by @dthoward96 in #79
- update dev by @dthoward96 in #81
- V1.2.2 Update by @dthoward96 in #82
Full Changelog: v1.2.1...v1.2.2
Contributors
dthoward96