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fixed indents all four wdl files #22

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Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
version 1.0
## This is a test workflow that returns the hostname of the node the job is submitted to as a test for the Gizmo backend.
workflow hello_singularity_hostname {
call hostname {
}
call hostname {
}
output {
File stdout = hostname.out
}
Expand Down
4 changes: 2 additions & 2 deletions testWorkflows/helloHostname/helloHostname.wdl
Original file line number Diff line number Diff line change
@@ -1,8 +1,8 @@
version 1.0
## This is a test workflow that returns the hostname of the node the job is submitted to as a test for the Gizmo backend.
workflow hello_hostname {
call hostname {
}
call hostname {
}
output {
File stdout = hostname.out
}
Expand Down
20 changes: 10 additions & 10 deletions testWorkflows/localBatchFileScatter/parseBatchFile.wdl
Original file line number Diff line number Diff line change
Expand Up @@ -6,9 +6,9 @@ version 1.0
# inputs will be used for the tasks you define.
workflow parseBatchFile {
input {
File batchFile
File batchFile
}
Array[Object] batchInfo = read_objects(batchFile)
Array[Object] batchInfo = read_objects(batchFile)
scatter (job in batchInfo){
String sampleName = job.sampleName
File bamFile = job.bamLocation
Expand All @@ -20,11 +20,11 @@ workflow parseBatchFile {
}

} # End Scatter over the batch file
# Outputs that will be retained when execution is complete
# Outputs that will be retained when execution is complete
output {
Array[File] outputArray = test.item_out
}
# End workflow
}
# End workflow
}

#### TASK DEFINITIONS
Expand All @@ -35,12 +35,12 @@ task test {
String in2
String in3
}
command {
command {
echo ~{in1}
echo ~{in2}
echo ~{in3}
}
output {
File item_out = stdout()
}
}
output {
File item_out = stdout()
}
}
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