Skip to content

Commit

Permalink
Deploying to gh-pages from @ c7c641b 🚀
Browse files Browse the repository at this point in the history
  • Loading branch information
cmungall committed May 9, 2024
1 parent f1f7ed1 commit a70847b
Show file tree
Hide file tree
Showing 354 changed files with 2,499 additions and 2,499 deletions.
Original file line number Diff line number Diff line change
Expand Up @@ -21,11 +21,11 @@ URI: [biolink:aggregator_knowledge_source](https://w3id.org/biolink/vocab/aggreg

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/comments.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ URI: [rdfs:comment](rdfs:comment)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/evidence_type.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ URI: [ontoassoc:evidence_type](https://w3id.org/oak/association/evidence_type)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/negated.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ URI: [ontoassoc:negated](https://w3id.org/oak/association/negated)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | yes |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | yes |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | yes |



Expand Down
4 changes: 2 additions & 2 deletions _sources/datamodels/association/object.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -29,10 +29,10 @@ URI: [rdf:object](rdf:object)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/object_closure.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ URI: [ontoassoc:object_closure](https://w3id.org/oak/association/object_closure)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ URI: [ontoassoc:object_closure_label](https://w3id.org/oak/association/object_cl

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/object_label.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -25,9 +25,9 @@ URI: [sssom:object_label](https://w3id.org/sssom/object_label)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
4 changes: 2 additions & 2 deletions _sources/datamodels/association/predicate.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -27,10 +27,10 @@ URI: [rdf:predicate](rdf:predicate)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [PropertyValue](PropertyValue.md) | A generic tag-value that can be associated with an association | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/predicate_label.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -25,9 +25,9 @@ URI: [sssom:predicate_label](https://w3id.org/sssom/predicate_label)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -21,11 +21,11 @@ URI: [biolink:primary_knowledge_source](https://w3id.org/biolink/vocab/primary_k

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [ParserConfiguration](ParserConfiguration.md) | Settings that determine behavior when parsing associations | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/property_values.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ URI: [ontoassoc:property_values](https://w3id.org/oak/association/property_value

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
4 changes: 2 additions & 2 deletions _sources/datamodels/association/publications.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,10 +21,10 @@ URI: [biolink:publications](https://w3id.org/biolink/vocab/publications)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no |



Expand Down
4 changes: 2 additions & 2 deletions _sources/datamodels/association/subject.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,10 +21,10 @@ URI: [rdf:subject](rdf:subject)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [AssociationChange](AssociationChange.md) | A change object describing a change between two associations | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/subject_closure.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ URI: [ontoassoc:subject_closure](https://w3id.org/oak/association/subject_closur

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ URI: [ontoassoc:subject_closure_label](https://w3id.org/oak/association/subject_

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/subject_label.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -25,9 +25,9 @@ URI: [sssom:subject_label](https://w3id.org/sssom/subject_label)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/association/supporting_objects.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,9 +21,9 @@ URI: [ontoassoc:supporting_objects](https://w3id.org/oak/association/supporting_

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |
| [Association](Association.md) | A generic association between a thing (subject) and another thing (object) | no |
| [PositiveOrNegativeAssociation](PositiveOrNegativeAssociation.md) | | no |
| [NegatedAssociation](NegatedAssociation.md) | A negated association between a thing (subject) and another thing (object) | no |



Expand Down
2 changes: 1 addition & 1 deletion _sources/datamodels/mapping-rules/rules.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -16,8 +16,8 @@ URI: [mappingrules:rules](https://w3id.org/oak/mapping-rules-datamodel/rules)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no |
| [MappingRuleCollection](MappingRuleCollection.md) | A collection of mapping rules | no |
| [RuleSet](RuleSet.md) | A set of rules for generating synonyms or alternate lexical elements | no |



Expand Down
4 changes: 2 additions & 2 deletions _sources/datamodels/obograph/id.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,10 +21,10 @@ URI: [obographs:id](https://github.com/geneontology/obographs/id)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no |
| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no |
| [SubsetDefinition](SubsetDefinition.md) | | no |
| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no |
| [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no |
| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no |



Expand Down
4 changes: 2 additions & 2 deletions _sources/datamodels/obograph/lang.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,11 +21,11 @@ URI: [obographs:lang](https://github.com/geneontology/obographs/lang)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no |
| [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no |
| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no |
| [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no |
| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no |
| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no |
| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no |



Expand Down
4 changes: 2 additions & 2 deletions _sources/datamodels/obograph/lbl.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,10 +21,10 @@ URI: [rdfs:label](http://www.w3.org/2000/01/rdf-schema#label)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no |
| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no |
| [SubsetDefinition](SubsetDefinition.md) | | no |
| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no |
| [SynonymTypeDefinition](SynonymTypeDefinition.md) | | no |
| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no |



Expand Down
18 changes: 9 additions & 9 deletions _sources/datamodels/obograph/meta.md.txt
Original file line number Diff line number Diff line change
Expand Up @@ -21,20 +21,20 @@ URI: [obographs:meta](https://github.com/geneontology/obographs/meta)

| Name | Description | Modifies Slot |
| --- | --- | --- |
| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no |
| [LogicalDefinitionAxiom](LogicalDefinitionAxiom.md) | An axiom that defines a class in terms of a genus or set of genus classes and... | no |
| [PropertyChainAxiom](PropertyChainAxiom.md) | An axiom that represents an OWL property chain, e | no |
| [GraphDocument](GraphDocument.md) | A graph document is a collection of graphs together with a set of prefixes th... | no |
| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no |
| [SynonymPropertyValue](SynonymPropertyValue.md) | A property value that represents an assertion about a synonym of an entity | no |
| [EquivalentNodesSet](EquivalentNodesSet.md) | A clique of nodes that are all mutually equivalent | no |
| [DefinitionPropertyValue](DefinitionPropertyValue.md) | A property value that represents an assertion about the textual definition of... | no |
| [Graph](Graph.md) | A graph is a collection of nodes and edges and other axioms that represents a... | no |
| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no |
| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no |
| [Node](Node.md) | A node is a class, property, or other entity in an ontology | no |
| [Axiom](Axiom.md) | A generic grouping for any OWL axiom or group of axioms that is not captured ... | no |
| [EquivalentNodesSet](EquivalentNodesSet.md) | A clique of nodes that are all mutually equivalent | no |
| [Edge](Edge.md) | An edge is a simple typed relationship between two nodes | no |
| [DisjointClassExpressionsAxiom](DisjointClassExpressionsAxiom.md) | An axiom that defines a set of classes or class expressions as being mutually... | no |
| [XrefPropertyValue](XrefPropertyValue.md) | A property value that represents an assertion about an external reference to ... | no |
| [PropertyValue](PropertyValue.md) | A generic grouping for the different kinds of key-value associations on objec... | no |
| [Axiom](Axiom.md) | A generic grouping for any OWL axiom or group of axioms that is not captured ... | no |
| [LogicalDefinitionAxiom](LogicalDefinitionAxiom.md) | An axiom that defines a class in terms of a genus or set of genus classes and... | no |
| [PropertyChainAxiom](PropertyChainAxiom.md) | An axiom that represents an OWL property chain, e | no |
| [GraphDocument](GraphDocument.md) | A graph document is a collection of graphs together with a set of prefixes th... | no |
| [BasicPropertyValue](BasicPropertyValue.md) | A property value that represents an assertion about an entity that is not a d... | no |
| [DomainRangeAxiom](DomainRangeAxiom.md) | This groups potentially multiple axioms that constrain the usage of a propert... | no |


Expand Down
Loading

0 comments on commit a70847b

Please sign in to comment.