[pre-commit.ci] Automatic python and c++ formatting

OpenGATE · Sep 13, 2024 · 1e7d1de · 1e7d1de
1 parent 1f45b1a
commit 1e7d1de
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Showing 7 changed files with 25 additions and 9 deletions.
diff --git a/opengate/tests/src/test010_generic_source.py b/opengate/tests/src/test010_generic_source.py
@@ -6,7 +6,9 @@
 from scipy.spatial.transform import Rotation
 
 if __name__ == "__main__":
-    paths = utility.get_default_test_paths(__file__, "gate_test010_generic_source", output_folder="test010")
+    paths = utility.get_default_test_paths(
+        __file__, "gate_test010_generic_source", output_folder="test010"
+    )
 
     # create the simulation
     sim = gate.Simulation()

diff --git a/opengate/tests/src/test012_mt_dose_actor.py b/opengate/tests/src/test012_mt_dose_actor.py
@@ -8,7 +8,9 @@
 
 
 if __name__ == "__main__":
-    paths = utility.get_default_test_paths(__file__, "gate_test008_dose_actor", output_folder="test012")
+    paths = utility.get_default_test_paths(
+        __file__, "gate_test008_dose_actor", output_folder="test012"
+    )
 
     # create the simulation
     sim = gate.Simulation()

diff --git a/opengate/tests/src/test050_let_actor_letd_mt.py b/opengate/tests/src/test050_let_actor_letd_mt.py
@@ -8,7 +8,9 @@
 
 if __name__ == "__main__":
     do_debug = False
-    paths = utility.get_default_test_paths(__file__, "test050_let_actor_letd", "test050")
+    paths = utility.get_default_test_paths(
+        __file__, "test050_let_actor_letd", "test050"
+    )
     ref_path = paths.output_ref
 
     # create the simulation

diff --git a/opengate/tests/src/test059_tpsource_abs_dose.py b/opengate/tests/src/test059_tpsource_abs_dose.py
@@ -12,7 +12,9 @@
 from opengate.tests.utility import plot_img_axis
 
 if __name__ == "__main__":
-    paths = utility.get_default_test_paths(__file__, "gate_test044_pbs", output_folder="test059")
+    paths = utility.get_default_test_paths(
+        __file__, "gate_test044_pbs", output_folder="test059"
+    )
     output_path = paths.output
     ref_path = paths.output_ref
 

diff --git a/opengate/tests/src/test059_tpsource_flat_generation_flag.py b/opengate/tests/src/test059_tpsource_flat_generation_flag.py
@@ -22,7 +22,9 @@ def calculate_mean_unc(edep_arr, unc_arr, edep_thresh_rel=0.7):
 
 
 if __name__ == "__main__":
-    paths = utility.get_default_test_paths(__file__, "gate_test044_pbs", output_folder="test059")
+    paths = utility.get_default_test_paths(
+        __file__, "gate_test044_pbs", output_folder="test059"
+    )
     output_path = paths.output
     ref_path = paths.output_ref
 

diff --git a/opengate/tests/src/test059_tpsource_optics_vbl.py b/opengate/tests/src/test059_tpsource_optics_vbl.py
@@ -13,7 +13,9 @@
 
 if __name__ == "__main__":
     # ------ INITIALIZE SIMULATION ENVIRONMENT ----------
-    paths = utility.get_default_test_paths(__file__, "gate_test044_pbs", output_folder="test059")
+    paths = utility.get_default_test_paths(
+        __file__, "gate_test044_pbs", output_folder="test059"
+    )
     output_path = paths.output
     ref_path = paths.output_ref
 

diff --git a/opengate/tests/src/test059_tpsource_range_ref.py b/opengate/tests/src/test059_tpsource_range_ref.py
@@ -11,7 +11,9 @@
 from opengate.tests.utility import print_test
 
 if __name__ == "__main__":
-    paths = utility.get_default_test_paths(__file__, "gate_test044_pbs", output_folder="test059")
+    paths = utility.get_default_test_paths(
+        __file__, "gate_test044_pbs", output_folder="test059"
+    )
     output_path = paths.output
     ref_path = paths.output_ref
 
@@ -137,7 +139,7 @@
     # read output and ref
     print("Compare ", dose_path)
     img_mhd_out = itk.imread(dose_path)
-    #data = np.flip(itk.GetArrayViewFromImage(img_mhd_out), axis=0)
+    # data = np.flip(itk.GetArrayViewFromImage(img_mhd_out), axis=0)
     data = itk.GetArrayViewFromImage(img_mhd_out)
     spacing = np.array(img_mhd_out.GetSpacing())
     print(data.shape, spacing)
@@ -152,6 +154,8 @@
     print(f"range80_gate9_E120MeV = {range80_gate9_E120MeV}")
     if abs(range_opengate - range80_gate9_E120MeV) > thresh:
         ok = False
-    print_test(ok, f"Compare ranges {range_opengate} and {range80_gate9_E120MeV} >? {thresh}")
+    print_test(
+        ok, f"Compare ranges {range_opengate} and {range80_gate9_E120MeV} >? {thresh}"
+    )
 
     utility.test_ok(ok)