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39 Open 354 Closed
39 Open 354 Closed
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Issues list

Add UBERON bridge between species-specific and taxon-neutral ontology terms multispecies discovery Adding new species to CELLxGENE schema CELLxGENE Discover dataset schema
#1003 opened Sep 3, 2024 by brianraymor
@brianraymor
Add CL bridge between species-specific and taxon-neutral ontology terms multispecies discovery Adding new species to CELLxGENE schema CELLxGENE Discover dataset schema
#1002 opened Sep 3, 2024 by brianraymor
@brianraymor
Update requirements for obsm['spatial'] 5.3 Next minor CELLxGENE schema version after 5.2 bug Something isn't working schema CELLxGENE Discover dataset schema
#999 opened Aug 23, 2024 by brianraymor
@brianraymor
1
Teichmann CxG annotations update curation Updates to published datasets
#997 opened Aug 23, 2024 by JABelfiore
1
Draft Drosophila melanogaster multispecies discovery Adding new species to CELLxGENE schema CELLxGENE Discover dataset schema
#996 opened Aug 22, 2024 by brianraymor
@brianraymor
Draft Danio rerio multispecies discovery Adding new species to CELLxGENE schema CELLxGENE Discover dataset schema
#995 opened Aug 22, 2024 by brianraymor
@brianraymor
Publish schema 5.2.0 5.2 Next minor CELLxGENE schema version after 5.1 schema CELLxGENE Discover dataset schema
#994 opened Aug 21, 2024 by brianraymor
2 tasks
@brianraymor
cellxgene-schema CLI must add annotation for var['feature_type'] 5.2 Next minor CELLxGENE schema version after 5.1 curation software
#991 opened Aug 21, 2024 by brianraymor
@nayib-jose-gloria
cellxgene-schema CLI must update annotation of var['feature_length'] 5.2 Next minor CELLxGENE schema version after 5.1 curation software
#990 opened Aug 20, 2024 by brianraymor
@nayib-jose-gloria
cellxgene-schema CLI must update validation of obs['development_stage_ontology_term_id'] 5.2 Next minor CELLxGENE schema version after 5.1 curation software
#988 opened Aug 20, 2024 by brianraymor
@nayib-jose-gloria
Gene Expression and Cell Type Issues in published Collection curation Updates to published datasets
#981 opened Aug 14, 2024 by Jchaffer787
@Jchaffer787
Discovery: Reader and Modeling for Visium HD discovery dp Data Platform Team work
#977 opened Aug 8, 2024 by brianraymor
@jychien @nayib-jose-gloria
1
Add requirements for Visium HD Spatial Gene Expression schema CELLxGENE Discover dataset schema
#976 opened Aug 8, 2024 by brianraymor
@brianraymor
Add requirements for Visium CytAssist Spatial Gene Expression N.N.N Placeholder for 2024 issues - will reassign to minor release schema CELLxGENE Discover dataset schema
#975 opened Aug 8, 2024 by brianraymor
@brianraymor
Process h5ad in constant memory dp Data Platform Team work tech Tech issues that do not require product prioritization. Tech debt, tooling, ops, etc.
#963 opened Jul 8, 2024 by Bento007
@ebezzi @nayib-jose-gloria
7
ontology updates w/ 5.2.0 5.2 Next minor CELLxGENE schema version after 5.1 curation Updates to published datasets
#958 opened Jun 11, 2024 by jahilton
@jahilton
5
Add mouse strain 5.3 Next minor CELLxGENE schema version after 5.2 discovery schema CELLxGENE Discover dataset schema
#956 opened Jun 6, 2024 by brianraymor
2
cellxgene-schema CLI must update validation of obs['suspension_type'] 5.2 Next minor CELLxGENE schema version after 5.1 curation software dp Data Platform Team work
#953 opened Jun 5, 2024 by brianraymor
@nayib-jose-gloria
Update self_reported_ethnicity_term_id 5.3 Next minor CELLxGENE schema version after 5.2 schema CELLxGENE Discover dataset schema
#874 opened May 1, 2024 by brianraymor
Apply consistent style to assay references editorial schema CELLxGENE Discover dataset schema
#870 opened May 1, 2024 by brianraymor
@brianraymor
cellxgene-schema CLI must add validation for obs['modality'] and update validation for X curation software dp Data Platform Team work
#869 opened Apr 30, 2024 by brianraymor
Explore validation for the orientation of visium images curator request discovery schema CELLxGENE Discover dataset schema
#852 opened Apr 19, 2024 by brianraymor
Mammary gland cell terms from breast atlas Jamboree curation Updates to published datasets
#849 opened Apr 17, 2024 by aleixpuigb
1 of 3 tasks
@jahilton
1
Redesign table in X (Matrix Layers) to incorporate modality schema CELLxGENE Discover dataset schema
#848 opened Apr 17, 2024 by brianraymor
1
@brianraymor
6
Improve validation for cases where there is only one donor_id value in obs discovery schema CELLxGENE Discover dataset schema
#820 opened Mar 22, 2024 by brianraymor
@brianraymor
1
ProTip! Find all open issues with in progress development work with linked:pr.