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jhudsl-robot committed Jun 29, 2023
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Expand Up @@ -4,11 +4,11 @@ AnVIL_Book_Instructor_Guide https://jhudatascience.org/AnVIL_Book_Instructor_Gui
GDSCN_Book_Statistics_for_Genomics_PCA https://jhudatascience.org/GDSCN_Book_Statistics_for_Genomics_PCA/ https://github.com/jhudsl/GDSCN_Book_Statistics_for_Genomics_PCA A set of lab modules for PCA analysis anvil, gdscn, genomics TRUE TRUE FALSE Statistics for Genomics: PCA
AnVIL_Book_Epigenetics_Intro https://hutchdatascience.org/AnVIL_Book_Epigenetics_Intro/ https://github.com/fhdsl/AnVIL_Book_Epigenetics_Intro "An introductory activity for epigenetics, or the idea of ""nature versus nurture"" in genetics. Learners use the UCSC Genome Browser." anvil, course, epigenetics, human-genomes, module, ucsc-browser TRUE FALSE FALSE Epigenetics on AnVIL: Nature vs Nurture
GDSCN_SARS_RStudio_on_AnVIL https://hutchdatascience.org/GDSCN_SARS_RStudio_on_AnVIL/ https://github.com/fhdsl/GDSCN_SARS_RStudio_on_AnVIL Lab module and lectures for identifying phylogenetic history of SARS variants using R anvil, gdscn, phylogenetic-analysis, sars-cov-2 TRUE TRUE FALSE GDSCN Book: SARS with RStudio on AnVIL
AnVIL_SRA_Data https://hutchdatascience.org/AnVIL_SRA_Data/ https://github.com/fhdsl/AnVIL_SRA_Data Pull Sequence Read Archive (SRA) data into AnVIL anvil, genomics, ncbi-database, sequence-read-archive TRUE FALSE FALSE AnVIL: SRA Data
AnVIL_Book_Getting_Started https://jhudatascience.org/AnVIL_Book_Getting_Started https://github.com/jhudsl/AnVIL_Book_Getting_Started A guide for getting started using AnVIL anvil, cloud-computing TRUE FALSE FALSE Getting Started on AnVIL
AnVIL_SRA_Data https://hutchdatascience.org/AnVIL_SRA_Data/ https://github.com/fhdsl/AnVIL_SRA_Data Pull Sequence Read Archive (SRA) data into AnVIL anvil, genomics, ncbi-database, sequence-read-archive TRUE FALSE FALSE AnVIL: SRA Data
AnVIL_Demos https://hutchdatascience.org/AnVIL_Demos/ https://github.com/fhdsl/AnVIL_Demos ⏱ 30-minute demos and tutorials from our live AnVIL series anvil, cloud, cloud-computing, genomics, research TRUE FALSE FALSE AnVIL Demos
GDSCN_Book_SARS_Galaxy_on_AnVIL https://jhudatascience.org/GDSCN_Book_SARS_Galaxy_on_AnVIL/ https://github.com/jhudsl/GDSCN_Book_SARS_Galaxy_on_AnVIL Lab module and lectures for variant detection in SARS-CoV-2 using Galaxy anvil, gdscn, genomics, module, sars-cov-2, variant-detection TRUE TRUE FALSE GDSCN Book: SARS with Galaxy on AnVIL
GDSCN_Book_swirl https://jhudatascience.org/GDSCN_Book_swirl/ https://github.com/jhudsl/GDSCN_Book_swirl Lab exercise: learn basic R programming through interactive swirl lessons gdscn, swirl FALSE TRUE FALSE Intro R with swirl
GDSCN_Book_Statistics_for_Genomics_scRNA-seq http://jhudatascience.org/GDSCN_Book_Statistics_for_Genomics_scRNA-seq/ https://github.com/jhudsl/GDSCN_Book_Statistics_for_Genomics_scRNA-seq A set of lab modules for single cell RNA-seq analysis anvil, gdscn, rna-seq, scrna-seq TRUE TRUE FALSE Statistics for Genomics: scRNAseq
GDSCN_Book_SARS_Galaxy_on_AnVIL https://jhudatascience.org/GDSCN_Book_SARS_Galaxy_on_AnVIL/ https://github.com/jhudsl/GDSCN_Book_SARS_Galaxy_on_AnVIL Lab module and lectures for variant detection in SARS-CoV-2 using Galaxy anvil, gdscn, genomics, module, sars-cov-2, variant-detection TRUE TRUE FALSE GDSCN Book: SARS with Galaxy on AnVIL
GDSCN_Book_Statistics_for_Genomics_Differential_Expression https://jhudatascience.org/GDSCN_Book_Statistics_for_Genomics_Differential_Expression/ https://github.com/jhudsl/GDSCN_Book_Statistics_for_Genomics_Differential_Expression A set of lab modules for an introduction to differential gene expression anvil, cloud-computing, gdscn, gene-expression TRUE TRUE FALSE Statistics for Genomics: Differential Expression
GDSCN_Book_Statistics_for_Genomics_scRNA-seq http://jhudatascience.org/GDSCN_Book_Statistics_for_Genomics_scRNA-seq/ https://github.com/jhudsl/GDSCN_Book_Statistics_for_Genomics_scRNA-seq A set of lab modules for single cell RNA-seq analysis anvil, gdscn, rna-seq, scrna-seq TRUE TRUE FALSE Statistics for Genomics: scRNAseq
AnVIL_Phylogenetic-Techniques https://jhudatascience.org/AnVIL_Phylogenetic-Techniques/ https://github.com/jhudsl/AnVIL_Phylogenetic-Techniques A semester-long course on the basics of molecular phylogenetic techniques anvil, r-programming TRUE FALSE FALSE Molecular Phylogenetic Techniques

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