Merge pull request #1848 from glotzerlab/release-4.8.1

Release 4.8.1
glotzerlab · Jul 18, 2024 · bf35be6 · bf35be6
2 parents 8e39db3 + cc91c5f
commit bf35be6
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Showing 10 changed files with 27 additions and 17 deletions.
diff --git a/.bumpversion.cfg b/.bumpversion.cfg
@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 4.8.0
+current_version = 4.8.1
 commit = False
 tag = False
 parse = ^(?P<major>0|[1-9]\d*)\.(?P<minor>0|[1-9]\d*)\.(?P<patch>0|[1-9]\d*)(?:-(?P<prerelease>(?:0|[1-9]\d*|\d*[a-zA-Z-][0-9a-zA-Z-]*))(?:\.(?P<number>0|[1-9]\d*|\d*[a-zA-Z-][0-9a-zA-Z-]*)))?$

diff --git a/.github/ISSUE_TEMPLATE/bug_report.yml b/.github/ISSUE_TEMPLATE/bug_report.yml
@@ -62,7 +62,7 @@ body:
     attributes:
       label: HOOMD-blue version
       description: What version of HOOMD-blue are you using?
-      placeholder: 4.8.0
+      placeholder: 4.8.1
     validations:
       required: true
   - type: markdown

diff --git a/.github/ISSUE_TEMPLATE/release.md b/.github/ISSUE_TEMPLATE/release.md
@@ -1,7 +1,7 @@
 ---
 name: Release checklist
 about: '[for maintainer use]'
-title: 'Release 4.8.0'
+title: 'Release 4.8.1'
 labels: ''
 assignees: 'joaander'
 

diff --git a/BUILDING.rst b/BUILDING.rst
@@ -145,7 +145,7 @@ Clone using Git_::
 
    $ git clone --recursive https://github.com/glotzerlab/hoomd-blue
 
-Release tarballs are also available as `GitHub release`_ assets: `Download hoomd-4.8.0.tar.gz`_.
+Release tarballs are also available as `GitHub release`_ assets: `Download hoomd-4.8.1.tar.gz`_.
 
 .. seealso::
 
@@ -158,7 +158,7 @@ Release tarballs are also available as `GitHub release`_ assets: `Download hoomd
     Execute ``git submodule update --init`` to fetch the submodules each time you switch branches
     and the submodules show as modified.
 
-.. _Download hoomd-4.8.0.tar.gz: https://github.com/glotzerlab/hoomd-blue/releases/download/v4.8.0/hoomd-4.8.0.tar.gz
+.. _Download hoomd-4.8.1.tar.gz: https://github.com/glotzerlab/hoomd-blue/releases/download/v4.8.1/hoomd-4.8.1.tar.gz
 .. _GitHub release: https://github.com/glotzerlab/hoomd-blue/releases
 .. _git book: https://git-scm.com/book
 .. _Git: https://git-scm.com/

diff --git a/CHANGELOG.rst b/CHANGELOG.rst
@@ -7,6 +7,16 @@ Change Log
 4.x
 ---
 
+4.8.1 (2024-07-18)
+^^^^^^^^^^^^^^^^^^
+
+Fixed:
+
+* Prevent illegal instruction when accessing 0 length snapshot arrays
+  (`#1846 <https://github.com/glotzerlab/hoomd-blue/pull/1846>`__)
+* Fix MPCD compiler warning.
+  (`#1845 <https://github.com/glotzerlab/hoomd-blue/pull/1845>`__)
+
 4.8.0 (2024-07-11)
 ^^^^^^^^^^^^^^^^^^
 

diff --git a/CMakeLists.txt b/CMakeLists.txt
@@ -18,7 +18,7 @@ add_subdirectory (CMake)
 
 ################################
 ## Version information
-set(HOOMD_VERSION_RAW "4.8.0")
+set(HOOMD_VERSION_RAW "4.8.1")
 string(REGEX MATCH "(.*)\\.(.*)\\.(.*)$" _hoomd_version_match ${HOOMD_VERSION_RAW})
 set(HOOMD_VERSION_MAJOR ${CMAKE_MATCH_1})
 set(HOOMD_VERSION_MINOR ${CMAKE_MATCH_2})

diff --git a/INSTALLING.rst b/INSTALLING.rst
@@ -20,19 +20,19 @@ Serial CPU and single GPU builds
 *linux-64*, *osx-64*, and *osx-arm64* platforms. Install the ``hoomd`` package from the conda-forge_
 channel into a conda environment::
 
-    $ mamba install hoomd=4.8.0
+    $ mamba install hoomd=4.8.1
 
 .. _conda-forge: https://conda-forge.org/docs/user/introduction.html
 
 ``conda`` auto-detects whether your system has a GPU and attempts to install the appropriate
 package. Override this and force the GPU enabled package installation with::
 
     $ export CONDA_OVERRIDE_CUDA="12.0"
-    $ mamba install "hoomd=4.8.0=*gpu*" "cuda-version=12.0"
+    $ mamba install "hoomd=4.8.1=*gpu*" "cuda-version=12.0"
 
 Similarly, you can force CPU only package installation with::
 
-    $ mamba install "hoomd=4.8.0=*cpu*"
+    $ mamba install "hoomd=4.8.1=*cpu*"
 
 .. note::
 
@@ -42,7 +42,7 @@ Similarly, you can force CPU only package installation with::
 .. note::
 
     Run time compilation is no longer available on conda-forge builds starting with HOOMD-blue
-    4.8.0.
+    4.8.1.
 
 .. tip::
 

diff --git a/hoomd/hpmc/external/user.py b/hoomd/hpmc/external/user.py
@@ -85,9 +85,9 @@ class CPPExternalPotential(ExternalField):
         Your code *must* return a value.
 
     .. _VectorMath.h: https://github.com/glotzerlab/hoomd-blue/blob/\
-            v4.8.0/hoomd/VectorMath.h
+            v4.8.1/hoomd/VectorMath.h
     .. _BoxDim.h: https://github.com/glotzerlab/hoomd-blue/blob/\
-            v4.8.0/hoomd/BoxDim.h
+            v4.8.1/hoomd/BoxDim.h
 
     .. rubric:: Example:
 
@@ -148,7 +148,7 @@ def __init__(self, code, param_array=[]):
         self.code = code
 
         warnings.warn(
-            "CPPExternalPotential is deprecated since 4.8.0. "
+            "CPPExternalPotential is deprecated since 4.8.1. "
             "Use hpmc.external.linear or a custom component.",
             FutureWarning,
             stacklevel=2)

diff --git a/hoomd/hpmc/pair/user.py b/hoomd/hpmc/pair/user.py
@@ -76,7 +76,7 @@ class CPPPotentialBase(AutotunedObject):
                 HOOMD-blue source code.
 
     .. _VectorMath.h: https://github.com/glotzerlab/hoomd-blue/blob/\
-            v4.8.0/hoomd/VectorMath.h
+            v4.8.1/hoomd/VectorMath.h
 
     Note:
         Your code *must* return a value.
@@ -340,7 +340,7 @@ class CPPPotentialUnion(CPPPotentialBase):
 
     CPPPotentialUnion uses threaded execution on multiple CPU cores.
 
-    .. deprecated:: 4.8.0
+    .. deprecated:: 4.8.1
 
         ``num_cpu_threads >= 1`` is deprecated. Set ``num_cpu_threads = 1``.
 

diff --git a/sphinx-doc/conf.py b/sphinx-doc/conf.py
@@ -68,8 +68,8 @@
 copyright = f'2009-{year} The Regents of the University of Michigan'
 author = 'The Regents of the University of Michigan'
 
-version = '4.8.0'
-release = '4.8.0'
+version = '4.8.1'
+release = '4.8.1'
 
 language = 'en'