Initial template #7
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: Unit test | |
| env: | |
| # TODO: Set COMPONENT_NAME to the name of your Python package. | |
| COMPONENT_NAME: template | |
| # Most components should not modify the rest of this file. When needed, merge in updates from | |
| # https://github.com/glotzerlab/hoomd-component-template/ | |
| ############################################################################################# | |
| # HOOMD-blue version to build. | |
| HOOMD_BLUE_VERSION: 4.3.0 | |
| # prevent deadlocked MPI tests from causing the job to cancel | |
| MPIEXEC_TIMEOUT: 3000 | |
| # allow mpirun to execute as root in the tests | |
| OMPI_ALLOW_RUN_AS_ROOT: 1 | |
| OMPI_ALLOW_RUN_AS_ROOT_CONFIRM: 1 | |
| # allow openmpi to oversubscribe cores | |
| OMPI_MCA_rmaps_base_oversubscribe: 1 | |
| # prevent errors from mis-configured openib systems | |
| OMPI_MCA_btl: "vader,self" | |
| # import HOOMD out of the build directory | |
| PYTHONPATH: ${{ github.workspace }}/install | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| on: | |
| pull_request: | |
| push: | |
| branches: [trunk] | |
| workflow_dispatch: | |
| defaults: | |
| run: | |
| shell: bash | |
| jobs: | |
| build_test: | |
| name: Build and test [${{ matrix.name }}] | |
| runs-on: ubuntu-latest | |
| container: | |
| image: glotzerlab/ci:2023.11.27-cuda120_gcc11_py310 | |
| strategy: | |
| matrix: | |
| include: | |
| - name: 'CPU' | |
| enable_gpu: 'OFF' | |
| enable_mpi: 'OFF' | |
| - name: 'CPU, MPI' | |
| enable_gpu: 'OFF' | |
| enable_mpi: 'ON' | |
| - name: 'GPU' | |
| enable_gpu: 'ON' | |
| enable_mpi: 'OFF' | |
| - name: 'GPU, MPI' | |
| enable_gpu: 'ON' | |
| enable_mpi: 'ON' | |
| steps: | |
| - name: Restore cached HOOMD-blue build | |
| id: cache | |
| uses: actions/cache/restore@v3 | |
| with: | |
| path: install | |
| key: hoomd-blue-${{ env.HOOMD_BLUE_VERSION }}-${{ runner.os }}-mpi-${{ matrix.enable_mpi }}-gpu-${{ matrix.enable_gpu }} | |
| - name: Checkout HOOMD-blue | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| uses: actions/checkout@v4 | |
| with: | |
| repository: glotzerlab/hoomd-blue | |
| path: hoomd-blue | |
| submodules: true | |
| ref: v${{ env.HOOMD_BLUE_VERSION }} | |
| - name: Configure HOOMD-blue | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: | | |
| cmake -B build-hoomd-blue -S hoomd-blue \ | |
| -GNinja \ | |
| -DCMAKE_BUILD_TYPE=Release \ | |
| -DENABLE_GPU=${ENABLE_GPU} \ | |
| -DENABLE_MPI=${ENABLE_MPI} \ | |
| -DCUDA_ARCH_LIST="70" \ | |
| -DBUILD_TESTING=OFF \ | |
| -DPLUGINS="" \ | |
| -DCMAKE_INSTALL_PREFIX=${GITHUB_WORKSPACE}/install | |
| env: | |
| ENABLE_GPU: ${{ matrix.enable_gpu }} | |
| ENABLE_MPI: ${{ matrix.enable_mpi }} | |
| - name: Build HOOMD-blue | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| run: ninja install -j $(($(getconf _NPROCESSORS_ONLN) + 2)) | |
| working-directory: build-hoomd-blue | |
| - name: Cache HOOMD-blue build | |
| if: steps.cache.outputs.cache-hit != 'true' | |
| uses: actions/cache/save@v3 | |
| with: | |
| path: install | |
| key: hoomd-blue-${{ env.HOOMD_BLUE_VERSION }}-${{ runner.os }}-mpi-${{ matrix.enable_mpi }}-gpu-${{ matrix.enable_gpu }} | |
| - name: Checkout component | |
| uses: actions/checkout@v4 | |
| with: | |
| path: component | |
| - name: Configure component | |
| run: CMAKE_PREFIX_PATH=${GITHUB_WORKSPACE}/install cmake -S component -B build-component -GNinja -DCMAKE_BUILD_TYPE=Release | |
| - name: Build component | |
| run: ninja install -j $(($(getconf _NPROCESSORS_ONLN) + 2)) | |
| working-directory: build-component | |
| - name: Run pytest (serial) | |
| run: python3 -m pytest --pyargs hoomd.${COMPONENT_NAME} -x -v -ra --durations=0 --durations-min=0.1 | |
| - name: Run pytest (MPI) | |
| if: ${{ matrix.enable_mpi == 'ON' }} | |
| run: mpirun -n 2 ${GITHUB_WORKSPACE}/install/hoomd/pytest/pytest-openmpi.sh --pyargs hoomd.${COMPONENT_NAME} -x -v -ra --durations=0 --durations-min=0.1 || (( cat pytest.out.1 && exit 1 )) |