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# Inside of setup.cfg | ||
[metadata] | ||
description-file = README.md | ||
long_description = file: README.md | ||
long_description_content_type = text/markdown |
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from distutils.core import setup | ||
with open("README.md", "r", encoding="utf-8") as fh: | ||
long_description = fh.read() | ||
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setup( | ||
name = 'extaxsi', | ||
packages = ['extaxsi'], | ||
version = '0.3.3', | ||
version = '0.3.7', | ||
license='MIT', | ||
description = 'Extaxsi is a bioinformatic library aimed to elaborate and visualize molecular and taxonomic informations', | ||
long_description=long_description, | ||
long_description="""ExTaxsI functions \n | ||
Library overview \n | ||
ExTaxsI functions can be used separately from the ExTaxsI tool. In general, there are 6 main functions for the following tasks: \n | ||
* load_configurations() - **mandatory before using ExTaxsi functions** - setting NCBI API key to allow data query \n | ||
* db_creation() - create FASTA, accession with taxonomy or enriched database \n | ||
* taxonomyID_converter() - convert taxid into organism taxonomy and viceversa \n | ||
* sunburst_plot() - create sunburst plot \n | ||
* scatterplot() - create scatterplot \n | ||
* worldmap_plot() - create worldmap plot \n | ||
In the [github](https://github.com/qLSLab/ExTaxsI/blob/master/library/functions_installation_and_tutorial.ipynb) notebook installation and tutorials for configuration and usage are provided. \n | ||
Input files used are available in the **examples** directory. \n | ||
For any doubt, please write to [email protected]""", | ||
long_description_content_type="text/markdown", | ||
author = 'alberto brusati', | ||
author_email = '[email protected]', | ||
url = 'https://github.com/user/extaxsi', | ||
download_url = 'https://github.com/user/extaxsi/archive/refs/tags/v_03.tar.gz', | ||
download_url = 'https://github.com/qLSLab/ExTaxsI/archive/refs/tags/v_03.tar.gz', | ||
keywords = ['bioinformatic', 'ncbi', 'molecular data', 'visualization', 'taxonomy', 'converter'], | ||
install_requires=[ | ||
'biopython', | ||
|