v8.2.0

What's Changed

• Anopheles refactor PCA functions by @alimanfoo in #481

Full Changelog: v8.1.0...v8.2.0

v8.1.0

What's Changed

• Misc bug fixes by @alimanfoo in #480

Full Changelog: v8.0.1...v8.1.0

v8.0.1

thrashfest

v8.0.0

What's Changed

• Pass through render_mode when plotting a dendrogram by @alimanfoo in #453
• Update switcher.json by @leehart in #452
• Add some spinners; tweak progress by @alimanfoo in #462
• Improve performance applying site filters to SNP calls by @alimanfoo in #464
• Improve performance of dendrogram plotting and saving results to the cache by @alimanfoo in #465
• Remove dependency on jupyter-dash by @alimanfoo in #467
• Biallelic SNP calls and diplotypes by @alimanfoo in #468
• Biallelic pairwise distances and neighbour joining trees by @alimanfoo in #470

Full Changelog: v7.15.0...v8.0.0

v7.15.0

What's Changed

• Update switcher.json by @leehart in #447
• Add pairwise fst functions by @KellyLBennett in #419
• Improve performance of haplotype clustering by @alimanfoo in #450

Full Changelog: v7.14.1...v7.15.0

v7.14.1

What's Changed

• Update switcher.json by @leehart in #439
• Review API docs & refactor gene CNV frequencies functions by @alimanfoo in #444
• Remove Stamen basemaps by @leehart in #445

Full Changelog: v7.14.0...v7.14.1

v7.14.0

What's Changed

• Update Af1 cohort refs in notebooks, tests by @leehart in #426
• Add API docs by @leehart in #423
• Pin cohorts_analysis in tests, notebooks by @leehart in #428
• Update README.md re tagged docs by @leehart in #429
• Add test for sample sets with no phasing data by @ahernank in #433
• Add study_id & study_url to general metadata by @ahernank in #430
• Fix test for sample sets with no phasing data by @ahernank in #434
• Delete init character on bash examples - README.md by @ahernank in #431

Full Changelog: v7.13.0...v7.14.0

v7.13.0

What's Changed

• Add tools to bokeh plots by @harbi811 in #416
• Refactor CNV data functions for Anopheles (inc. Af1) by @leehart in #411
• Update cohorts version & expected frq col by @ahernank in #418

New Contributors

• @harbi811 made their first contribution in #416

Full Changelog: v7.12.0...v7.13.0

v7.12.0

What's Changed

• Implement plot_samples_bar() by @alimanfoo in #413

Full Changelog: v7.11.0...v7.12.0

v7.11.0

What's Changed

• Anopheles refactor part 7 - AIM genotype data by @alimanfoo in #405
• Adding XPEHH by @jonbrenas in #394

New Contributors

• @jonbrenas made their first contribution in #394

Full Changelog: v7.10.0...v7.11.0